Gene
RNA
| Item | Value |
|---|---|
| gene id | G1471249 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 60417747 ~ 60418109 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1682718 | True | 363 | lncRNA | 0.46 | 1 | 60417747 | 60418109 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940555 | NA | coding | downstream | 160739 | 60256848 ~ 60257008 (-) |
| thumpd3 | thumpd3 | coding | downstream | 172929 | 60235875 ~ 60244818 (-) |
| LOC110494258 | LOC106565585 | coding | downstream | 194183 | 60197620 ~ 60223564 (-) |
| LOC118940153 | LOC106565586 | coding | downstream | 224300 | 60191725 ~ 60193447 (-) |
| LOC110494257 | LOC106565586 | coding | downstream | 307498 | 60104033 ~ 60110249 (-) |
| LOC110494265 | cav3 | coding | upstream | 181979 | 60600088 ~ 60602922 (-) |
| LOC110494266 | LOC106565579 | coding | upstream | 198139 | 60616248 ~ 60618713 (-) |
| LOC110495180 | LOC106565578 | coding | upstream | 208075 | 60626184 ~ 60631176 (-) |
| LOC110494267 | LOC106565611 | coding | upstream | 226900 | 60645009 ~ 60652846 (-) |
| LOC110495181 | LOC106565577 | coding | upstream | 239027 | 60657136 ~ 60678786 (-) |
| G1471244 | NA | non-coding | downstream | 2086 | 60414928 ~ 60415661 (-) |
| G1471234 | NA | non-coding | downstream | 14169 | 60403369 ~ 60403578 (-) |
| G1471231 | NA | non-coding | downstream | 21949 | 60395594 ~ 60395798 (-) |
| G1471227 | NA | non-coding | downstream | 29324 | 60387939 ~ 60388423 (-) |
| G1471226 | NA | non-coding | downstream | 32012 | 60385491 ~ 60385735 (-) |
| G1471251 | NA | non-coding | upstream | 588 | 60418697 ~ 60418975 (-) |
| G1471260 | NA | non-coding | upstream | 7635 | 60425744 ~ 60425956 (-) |
| G1471396 | NA | non-coding | upstream | 91493 | 60509602 ~ 60509877 (-) |
| G1471397 | NA | non-coding | upstream | 91902 | 60510011 ~ 60510451 (-) |
| G1471537 | NA | non-coding | upstream | 171624 | 60589733 ~ 60590773 (-) |
| G1471219 | srgap3 | other | downstream | 41155 | 60375633 ~ 60376864 (-) |
| LOC110494253 | LOC106565590 | other | downstream | 421421 | 59990975 ~ 59999740 (-) |
| G1470802 | NA | other | downstream | 741053 | 59674541 ~ 59676694 (-) |
| hig1a | hig1a | other | downstream | 3185040 | 57229440 ~ 57233433 (-) |
| G1471564 | NA | other | upstream | 220071 | 60638180 ~ 60639335 (-) |
| ccdc174 | NA | other | upstream | 1828270 | 62246379 ~ 62250654 (-) |
| G1473866 | NA | other | upstream | 2312044 | 62730153 ~ 62730503 (-) |
| G1474395 | NA | other | upstream | 2630530 | 63048639 ~ 63100752 (-) |
| G1474425 | LOC106565679 | other | upstream | 2715716 | 63133825 ~ 63145087 (-) |
