G1471250


Basic Information

Item Value
gene id G1471250
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 60418669 ~ 60419077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1682719
ccgcttggtcctgttgcggtgggtgattctgtaagggcgttcgtctgtaggaggaagagaagcggaccaaagcgcagcgtggtggttattcatgttttaataaatcgctacacatgaacaaactaacaaaaacaagaaatgtgaaaccgcaaaacagtcctatcctgtgacaccaaacacagtgacaggaacaatcacccacaaacacacagtgaaacccaggctacctaagtatggttctcaatcagagacaactaatgacacctgcctctgattgagaaccatactaggccgaaaacatagaaatgccccaaaacacagaaaaacaaacatagactgcccacccaactcacgccctgaccatactaaataaatacaaaacaacagaaatagaggtcagaacgtgacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1682719 True 409 lncRNA 0.44 1 60418669 60419077

Neighbor

gene id symbol gene type direction distance location
srgap3 srgap3 coding upstream 35258 60265479 ~ 60383800 (+)
LOC110494259 LOC106565584 coding upstream 170759 60244785 ~ 60247910 (+)
LOC110494256 LOC106565588 coding upstream 323299 60078750 ~ 60095370 (+)
LOC110494255 LOC106565587 coding upstream 340232 60063250 ~ 60078437 (+)
LOC110494251 LOC106565596 coding upstream 531627 59857225 ~ 59887042 (+)
rad18 rad18 coding downstream 14849 60433926 ~ 60508595 (+)
LOC110494264 oxtr coding downstream 156601 60575678 ~ 60599614 (+)
LOC110494272 gpx1 coding downstream 551247 60970324 ~ 60971719 (+)
LOC110494274 brk1 coding downstream 595648 61014725 ~ 61019187 (+)
LOC110494275 LOC106565569 coding downstream 605631 61024708 ~ 61037602 (+)
G1471243 NA non-coding upstream 3102 60415358 ~ 60415567 (+)
G1470777 NA non-coding upstream 33111 60385296 ~ 60385558 (+)
G1470776 NA non-coding upstream 34555 60383908 ~ 60384114 (+)
G1470773 NA non-coding upstream 51263 60367151 ~ 60367406 (+)
G1471261 NA non-coding downstream 6881 60425958 ~ 60426167 (+)
G1471265 NA non-coding downstream 8481 60427558 ~ 60427761 (+)
G1471279 NA non-coding downstream 89554 60508631 ~ 60509137 (+)
G1471395 NA non-coding downstream 91384 60510461 ~ 60510808 (+)
G1471394 NA non-coding downstream 91793 60510870 ~ 60511105 (+)
G1470607 NA other upstream 314662 60101892 ~ 60104007 (+)
G1469076 NA other upstream 1910784 58507297 ~ 58507885 (+)
G1467219 NA other upstream 2804369 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2870491 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2935080 57478797 ~ 57554480 (+)
G1471723 LOC100380707 other downstream 553401 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1137242 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 2279426 62698503 ~ 62698815 (+)
G1473177 NA other downstream 2291262 62710339 ~ 62711136 (+)
G1474159 NA other downstream 2797871 63216948 ~ 63217594 (+)

Expression


Co-expression Network