G1471261


Basic Information

Item Value
gene id G1471261
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 60425958 ~ 60426167 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1682730
taccaccacagaccgatgctggcagtaaaaccacactcaatgagctgtataccgccataagcaaacaggaaaatgctcatccagaggcggcgttCCTAGTGAATGGGGACTTTAatgtagggaaacttaaatcagttaaACCTAATTTCTATGTCAAATGTTCAACCAGAGGAAAAAATAACAactgaccacctttactccacacacaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1682730 True 210 lncRNA 0.42 1 60425958 60426167

Neighbor

gene id symbol gene type direction distance location
srgap3 srgap3 coding upstream 42547 60265479 ~ 60383800 (+)
LOC110494259 LOC106565584 coding upstream 178048 60244785 ~ 60247910 (+)
LOC110494256 LOC106565588 coding upstream 330588 60078750 ~ 60095370 (+)
LOC110494255 LOC106565587 coding upstream 347521 60063250 ~ 60078437 (+)
LOC110494251 LOC106565596 coding upstream 538916 59857225 ~ 59887042 (+)
rad18 rad18 coding downstream 7759 60433926 ~ 60508595 (+)
LOC110494264 oxtr coding downstream 149511 60575678 ~ 60599614 (+)
LOC110494272 gpx1 coding downstream 544157 60970324 ~ 60971719 (+)
LOC110494274 brk1 coding downstream 588558 61014725 ~ 61019187 (+)
LOC110494275 LOC106565569 coding downstream 598541 61024708 ~ 61037602 (+)
G1471250 NA non-coding upstream 6881 60418669 ~ 60419077 (+)
G1471243 NA non-coding upstream 10391 60415358 ~ 60415567 (+)
G1470777 NA non-coding upstream 40400 60385296 ~ 60385558 (+)
G1470776 NA non-coding upstream 41844 60383908 ~ 60384114 (+)
G1471265 NA non-coding downstream 1391 60427558 ~ 60427761 (+)
G1471279 NA non-coding downstream 82464 60508631 ~ 60509137 (+)
G1471395 NA non-coding downstream 84294 60510461 ~ 60510808 (+)
G1471394 NA non-coding downstream 84703 60510870 ~ 60511105 (+)
G1471475 NA non-coding downstream 181251 60607418 ~ 60607656 (+)
G1470607 NA other upstream 321951 60101892 ~ 60104007 (+)
G1469076 NA other upstream 1918073 58507297 ~ 58507885 (+)
G1467219 NA other upstream 2811658 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2877780 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2942369 57478797 ~ 57554480 (+)
G1471723 LOC100380707 other downstream 546311 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1130152 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 2272336 62698503 ~ 62698815 (+)
G1473177 NA other downstream 2284172 62710339 ~ 62711136 (+)
G1474159 NA other downstream 2790781 63216948 ~ 63217594 (+)

Expression


Co-expression Network