Gene
RNA
| Item | Value |
|---|---|
| gene id | G1471279 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 60508631 ~ 60509137 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1682754 | True | 507 | lncRNA | 0.41 | 1 | 60508631 | 60509137 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rad18 | rad18 | coding | upstream | 36 | 60433926 ~ 60508595 (+) |
| srgap3 | srgap3 | coding | upstream | 125220 | 60265479 ~ 60383800 (+) |
| LOC110494259 | LOC106565584 | coding | upstream | 260721 | 60244785 ~ 60247910 (+) |
| LOC110494256 | LOC106565588 | coding | upstream | 413261 | 60078750 ~ 60095370 (+) |
| LOC110494255 | LOC106565587 | coding | upstream | 430194 | 60063250 ~ 60078437 (+) |
| LOC110494264 | oxtr | coding | downstream | 66541 | 60575678 ~ 60599614 (+) |
| LOC110494272 | gpx1 | coding | downstream | 461187 | 60970324 ~ 60971719 (+) |
| LOC110494274 | brk1 | coding | downstream | 505588 | 61014725 ~ 61019187 (+) |
| LOC110494275 | LOC106565569 | coding | downstream | 515571 | 61024708 ~ 61037602 (+) |
| LOC110494276 | NA | coding | downstream | 530141 | 61039278 ~ 61043722 (+) |
| G1471265 | NA | non-coding | upstream | 80870 | 60427558 ~ 60427761 (+) |
| G1471261 | NA | non-coding | upstream | 82464 | 60425958 ~ 60426167 (+) |
| G1471250 | NA | non-coding | upstream | 89554 | 60418669 ~ 60419077 (+) |
| G1471243 | NA | non-coding | upstream | 93064 | 60415358 ~ 60415567 (+) |
| G1470777 | NA | non-coding | upstream | 123073 | 60385296 ~ 60385558 (+) |
| G1471395 | NA | non-coding | downstream | 1324 | 60510461 ~ 60510808 (+) |
| G1471394 | NA | non-coding | downstream | 1733 | 60510870 ~ 60511105 (+) |
| G1471475 | NA | non-coding | downstream | 98281 | 60607418 ~ 60607656 (+) |
| G1471451 | NA | non-coding | downstream | 107038 | 60616175 ~ 60618887 (+) |
| G1471481 | LOC106565578 | non-coding | downstream | 118544 | 60627681 ~ 60631108 (+) |
| G1470607 | NA | other | upstream | 404624 | 60101892 ~ 60104007 (+) |
| G1469076 | NA | other | upstream | 2000746 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 2894331 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 2960453 | 57498305 ~ 57548178 (+) |
| G1467159 | LOC106565433 | other | upstream | 3025042 | 57478797 ~ 57554480 (+) |
| G1471723 | LOC100380707 | other | downstream | 463341 | 60972478 ~ 60999063 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 1047182 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 2189366 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 2201202 | 62710339 ~ 62711136 (+) |
| G1474159 | NA | other | downstream | 2707811 | 63216948 ~ 63217594 (+) |
