G1471732


Basic Information

Item Value
gene id G1471732
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 61022612 ~ 61023159 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1683238
tcccggacatttctgggggggaatggccctagccctcaccctccgatccatcaGGTCCCAGACgcgctcaatgggattgagatccgggctcttcgctggctatggcagaacactgacattcctgtcttgcagtaaATCAcccacagaatgagcagtatggctggtggcattgtcatgctggagggtcatgtcaggatgaagggtaccacatgcaggaaggtaccacatgagggaggaggatgtctttcctgtaacccacagtgttgagattgactgcaatgacaacaagctcagtccgatcatgctgtgacacaccgccccagaccatgacggaccctccacctccaaatcgatcctgctccagagtacaggcctcggcataacgctcattccttcgacgataaacacgaatccgaccatcacccctggtgagacaaaaccgtgactcatcagtgaagagcactttttgccagtcctgtctggtccagcgacgaagggtttgtgcccataggcgacgttgttgcctgtgatgtctggtgaggaactgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1683238 True 548 lncRNA 0.54 1 61022612 61023159

Neighbor

gene id symbol gene type direction distance location
LOC110494274 brk1 coding upstream 3871 61014725 ~ 61019187 (+)
LOC110494272 gpx1 coding upstream 50893 60970324 ~ 60971719 (+)
LOC110494264 oxtr coding upstream 422998 60575678 ~ 60599614 (+)
rad18 rad18 coding upstream 514017 60433926 ~ 60508595 (+)
srgap3 srgap3 coding upstream 639201 60265479 ~ 60383800 (+)
LOC110494275 LOC106565569 coding downstream 1549 61024708 ~ 61037602 (+)
LOC110494276 NA coding downstream 16119 61039278 ~ 61043722 (+)
LOC110494279 LOC106565568 coding downstream 31472 61054631 ~ 61129367 (+)
LOC110494281 gnai2 coding downstream 122352 61145511 ~ 61257368 (+)
LOC118940484 NA coding downstream 131736 61154895 ~ 61159504 (+)
G1471795 NA non-coding upstream 16784 61005602 ~ 61005828 (+)
G1471794 NA non-coding upstream 17272 61005067 ~ 61005340 (+)
G1471709 NA non-coding upstream 135883 60886363 ~ 60886729 (+)
G1471687 NA non-coding upstream 174868 60847292 ~ 60847744 (+)
G1471796 NA non-coding downstream 15149 61038308 ~ 61038515 (+)
G1471720 NA non-coding downstream 110019 61133178 ~ 61135571 (+)
G1471853 NA non-coding downstream 114060 61137219 ~ 61137589 (+)
G1471854 NA non-coding downstream 117615 61140774 ~ 61141184 (+)
G1471723 LOC100380707 other upstream 23549 60972478 ~ 60999063 (+)
G1470607 NA other upstream 918605 60101892 ~ 60104007 (+)
G1469076 NA other upstream 2514727 58507297 ~ 58507885 (+)
G1467219 NA other upstream 3408312 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 3474434 57498305 ~ 57548178 (+)
LOC110494283 LOC106565563 other downstream 533160 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 1675344 62698503 ~ 62698815 (+)
G1473177 NA other downstream 1687180 62710339 ~ 62711136 (+)
G1474159 NA other downstream 2193789 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 2635285 63658373 ~ 63663255 (+)

Expression


Co-expression Network