Gene
RNA
| Item | Value |
|---|---|
| gene id | G1471796 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 61038308 ~ 61038515 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1683304 | True | 208 | lncRNA | 0.40 | 1 | 61038308 | 61038515 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494275 | LOC106565569 | coding | upstream | 706 | 61024708 ~ 61037602 (+) |
| LOC110494274 | brk1 | coding | upstream | 19567 | 61014725 ~ 61019187 (+) |
| LOC110494272 | gpx1 | coding | upstream | 66589 | 60970324 ~ 60971719 (+) |
| LOC110494264 | oxtr | coding | upstream | 438694 | 60575678 ~ 60599614 (+) |
| rad18 | rad18 | coding | upstream | 529713 | 60433926 ~ 60508595 (+) |
| LOC110494276 | NA | coding | downstream | 763 | 61039278 ~ 61043722 (+) |
| LOC110494279 | LOC106565568 | coding | downstream | 16116 | 61054631 ~ 61129367 (+) |
| LOC110494281 | gnai2 | coding | downstream | 106996 | 61145511 ~ 61257368 (+) |
| LOC118940484 | NA | coding | downstream | 116380 | 61154895 ~ 61159504 (+) |
| LOC110494282 | LOC106565567 | coding | downstream | 231970 | 61270485 ~ 61276247 (+) |
| G1471732 | NA | non-coding | upstream | 15149 | 61022612 ~ 61023159 (+) |
| G1471795 | NA | non-coding | upstream | 32480 | 61005602 ~ 61005828 (+) |
| G1471794 | NA | non-coding | upstream | 32968 | 61005067 ~ 61005340 (+) |
| G1471709 | NA | non-coding | upstream | 151579 | 60886363 ~ 60886729 (+) |
| G1471720 | NA | non-coding | downstream | 94663 | 61133178 ~ 61135571 (+) |
| G1471853 | NA | non-coding | downstream | 98704 | 61137219 ~ 61137589 (+) |
| G1471854 | NA | non-coding | downstream | 102259 | 61140774 ~ 61141184 (+) |
| G1471855 | NA | non-coding | downstream | 104927 | 61143442 ~ 61143759 (+) |
| G1471723 | LOC100380707 | other | upstream | 39245 | 60972478 ~ 60999063 (+) |
| G1470607 | NA | other | upstream | 934301 | 60101892 ~ 60104007 (+) |
| G1469076 | NA | other | upstream | 2530423 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 3424008 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 3490130 | 57498305 ~ 57548178 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 517804 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 1659988 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 1671824 | 62710339 ~ 62711136 (+) |
| G1474159 | NA | other | downstream | 2178433 | 63216948 ~ 63217594 (+) |
| srsf3b | LOC106565658 | other | downstream | 2619929 | 63658373 ~ 63663255 (+) |
