G1471863


Basic Information

Item Value
gene id G1471863
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 61167024 ~ 61168190 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1683371
cggcacagatctggggaagggtaccaaaaaatgtctgcagtctTGGCCTCcattaaatggaagatgtttggaaacACCAGAACTCTtcgtcatggaggtgaccaagaacccaatggtcactgacgtggctccagagttcctctttcttttttcttttattgaccctttacttaactaggcaagttagttaagaacgtCTTATTGTCAATGATGGCCTGCCTTGTTGAGGGGCTGAACGACAGGTCGGCAAGGGTCAGCAAGGGGATTCGATctttcaacctttcggttactaatccaacgctcctaccactaggctaccctgccgcccctaatgaacttatcttctgcatccaactctgagtcttcctttccgatggcggtcctcatgagagccagtttcatcatagtgcttgatgttttttgcgactgcacttgaagaaattttcaaagttcttgaaatgttccatattgactgaccttcatgtcttaacctctccagggaaaatgcagagcgccaaattcgaagtaattactataaaaatcaaactttcattaagtcacacatgcaagatagcaaattaaaactacacttgttgtgaatccagccaacatgtcagatttcaaagaaggcttttcggcgaaagcaaactatgctattatctgaggatagcacctccgtaaacaaagagaaagcatatttcaaccctgcaggcgggACAcaaaaatcaaaatataattcacctttgacgagcttcttttgttggcactccaatatgtcccataaacatcacataTGGTCGCGCTCTGGTCACGCACCTCtaactaacagtacacttcaagtgaccctcgttcaagatggccgtacttcattACACaagaaaaacctcaaccaatttctaaagactgttgacatccagtggaagcgataggaactgtaAGAacgtcccttagaaatctggatttcCAATGAAAACCCTgccccgtcaccaagaagttaaagtaatggactgccgtttctctttgcttatttgagctgttcttgccataatatggacttggtccttTACCAAATAGCCCTATACCCCCCCACCTAGCCCTATACCCCCCCACCTAGCCCTATACCCCCCCACCTAGCCCTATACCCCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1683371 True 1147 lncRNA 0.44 2 61167024 61168190

Neighbor

gene id symbol gene type direction distance location
LOC118940484 NA coding upstream 7520 61154895 ~ 61159504 (+)
LOC110494279 LOC106565568 coding upstream 37657 61054631 ~ 61129367 (+)
LOC110494276 NA coding upstream 123302 61039278 ~ 61043722 (+)
LOC110494275 LOC106565569 coding upstream 129422 61024708 ~ 61037602 (+)
LOC110494274 brk1 coding upstream 148283 61014725 ~ 61019187 (+)
LOC110494282 LOC106565567 coding downstream 102295 61270485 ~ 61276247 (+)
LOC110493231 LOC106565565 coding downstream 185295 61353485 ~ 61458471 (+)
LOC110494283 LOC106565563 coding downstream 387683 61555873 ~ 61558328 (+)
LOC110495182 LOC106565603 coding downstream 411449 61579639 ~ 61581869 (+)
trnaf-gaa-81 NA coding downstream 420201 61588391 ~ 61588463 (+)
G1471858 NA non-coding upstream 22069 61144676 ~ 61144955 (+)
G1471855 NA non-coding upstream 23265 61143442 ~ 61143759 (+)
G1471854 NA non-coding upstream 25840 61140774 ~ 61141184 (+)
G1471853 NA non-coding upstream 29435 61137219 ~ 61137589 (+)
G1471720 NA non-coding upstream 31453 61133178 ~ 61135571 (+)
G1471868 NA non-coding downstream 10459 61178649 ~ 61178965 (+)
G1471911 NA non-coding downstream 80441 61248631 ~ 61249839 (+)
G1471915 cdhr4 non-coding downstream 91903 61260093 ~ 61260559 (+)
G1471916 NA non-coding downstream 92461 61260651 ~ 61260857 (+)
G1471917 NA non-coding downstream 93057 61261247 ~ 61261453 (+)
G1471723 LOC100380707 other upstream 167961 60972478 ~ 60999063 (+)
G1470607 NA other upstream 1063017 60101892 ~ 60104007 (+)
G1469076 NA other upstream 2659139 58507297 ~ 58507885 (+)
G1467219 NA other upstream 3552724 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 3618846 57498305 ~ 57548178 (+)
G1473171 LOC106581772 other downstream 1530313 62698503 ~ 62698815 (+)
G1473177 NA other downstream 1542149 62710339 ~ 62711136 (+)
G1474159 NA other downstream 2048758 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 2490254 63658373 ~ 63663255 (+)

Expression


Co-expression Network