G1471917


Basic Information

Item Value
gene id G1471917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 61261247 ~ 61261453 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1683427
CTCCCTCTGGATCAATAGTGAACATGGTGTCGTCTCCTGTAGTGATTGAGTAGCGGATGTTGTCAAAGGGCCAGTCTGTGTCTCTGGCCACCACCGTCCCCACTGCCGTACCAGGCCTGGTGCCCTCTGGGACACTGAAGAACAACGTCTGAAACACTGGATCATGTTCATTGACTGGGGTCACACTGACCAGCACACGCACCTGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1683427 True 207 lncRNA 0.56 1 61261247 61261453

Neighbor

gene id symbol gene type direction distance location
LOC110494281 gnai2 coding upstream 3879 61145511 ~ 61257368 (+)
LOC118940484 NA coding upstream 101743 61154895 ~ 61159504 (+)
LOC110494279 LOC106565568 coding upstream 131880 61054631 ~ 61129367 (+)
LOC110494276 NA coding upstream 217525 61039278 ~ 61043722 (+)
LOC110494275 LOC106565569 coding upstream 223645 61024708 ~ 61037602 (+)
LOC110494282 LOC106565567 coding downstream 9032 61270485 ~ 61276247 (+)
LOC110493231 LOC106565565 coding downstream 92032 61353485 ~ 61458471 (+)
LOC110494283 LOC106565563 coding downstream 294420 61555873 ~ 61558328 (+)
LOC110495182 LOC106565603 coding downstream 318186 61579639 ~ 61581869 (+)
trnaf-gaa-81 NA coding downstream 326938 61588391 ~ 61588463 (+)
G1471916 NA non-coding upstream 390 61260651 ~ 61260857 (+)
G1471915 cdhr4 non-coding upstream 688 61260093 ~ 61260559 (+)
G1471911 NA non-coding upstream 11408 61248631 ~ 61249839 (+)
G1471868 NA non-coding upstream 82282 61178649 ~ 61178965 (+)
G1471863 NA non-coding upstream 93057 61167024 ~ 61168190 (+)
G1471918 NA non-coding downstream 1835 61263288 ~ 61263749 (+)
G1471920 NA non-coding downstream 6579 61268032 ~ 61268267 (+)
G1471921 NA non-coding downstream 6830 61268283 ~ 61268494 (+)
G1472211 NA non-coding downstream 27192 61288645 ~ 61288866 (+)
G1472215 NA non-coding downstream 29416 61290869 ~ 61291131 (+)
G1471723 LOC100380707 other upstream 262184 60972478 ~ 60999063 (+)
G1470607 NA other upstream 1157240 60101892 ~ 60104007 (+)
G1469076 NA other upstream 2753362 58507297 ~ 58507885 (+)
G1467219 NA other upstream 3646947 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 3713069 57498305 ~ 57548178 (+)
G1473171 LOC106581772 other downstream 1437050 62698503 ~ 62698815 (+)
G1473177 NA other downstream 1448886 62710339 ~ 62711136 (+)
G1474159 NA other downstream 1955495 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 2396991 63658373 ~ 63663255 (+)

Expression


Co-expression Network