G1472260


Basic Information

Item Value
gene id G1472260
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 61323704 ~ 61323940 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1683813
gttgttgtcatctatacatagtcacttcaataactctacctacgtgtacatactacctcaactaactggtgcccccgcacattgactctgtaccggtacccccttgtatatagtcttgctattgttgttgtactgctgctctttaattacttgttacttttatctcttattctggTCCGcatttgaaactgcattgttggttaggggctcgtaagtaagcatttcactgttgtattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1683813 True 237 lncRNA 0.41 1 61323704 61323940

Neighbor

gene id symbol gene type direction distance location
LOC110494282 LOC106565567 coding upstream 47457 61270485 ~ 61276247 (+)
LOC110494281 gnai2 coding upstream 66336 61145511 ~ 61257368 (+)
LOC118940484 NA coding upstream 164200 61154895 ~ 61159504 (+)
LOC110494279 LOC106565568 coding upstream 194337 61054631 ~ 61129367 (+)
LOC110494276 NA coding upstream 279982 61039278 ~ 61043722 (+)
LOC110493231 LOC106565565 coding downstream 29545 61353485 ~ 61458471 (+)
LOC110494283 LOC106565563 coding downstream 231933 61555873 ~ 61558328 (+)
LOC110495182 LOC106565603 coding downstream 255699 61579639 ~ 61581869 (+)
trnaf-gaa-81 NA coding downstream 264451 61588391 ~ 61588463 (+)
LOC110494284 LOC106565564 coding downstream 353025 61676965 ~ 61684917 (+)
G1472219 NA non-coding upstream 29331 61294044 ~ 61294373 (+)
G1472215 NA non-coding upstream 32573 61290869 ~ 61291131 (+)
G1472211 NA non-coding upstream 34838 61288645 ~ 61288866 (+)
G1471921 NA non-coding upstream 55210 61268283 ~ 61268494 (+)
G1471920 NA non-coding upstream 55437 61268032 ~ 61268267 (+)
G1472262 NA non-coding downstream 4877 61328817 ~ 61329672 (+)
G1472264 NA non-coding downstream 6407 61330347 ~ 61331244 (+)
G1472268 NA non-coding downstream 8144 61332084 ~ 61333232 (+)
G1472271 NA non-coding downstream 10227 61334167 ~ 61334495 (+)
G1472275 NA non-coding downstream 14063 61338003 ~ 61338410 (+)
G1471723 LOC100380707 other upstream 324641 60972478 ~ 60999063 (+)
G1470607 NA other upstream 1219697 60101892 ~ 60104007 (+)
G1469076 NA other upstream 2815819 58507297 ~ 58507885 (+)
G1467219 NA other upstream 3709404 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 3775526 57498305 ~ 57548178 (+)
G1473171 LOC106581772 other downstream 1374563 62698503 ~ 62698815 (+)
G1473177 NA other downstream 1386399 62710339 ~ 62711136 (+)
G1474159 NA other downstream 1893008 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 2334504 63658373 ~ 63663255 (+)

Expression


Co-expression Network