Gene
RNA
| Item | Value |
|---|---|
| gene id | G1472262 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 61328817 ~ 61329672 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1683815 | True | 856 | lncRNA | 0.43 | 1 | 61328817 | 61329672 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494282 | LOC106565567 | coding | upstream | 52570 | 61270485 ~ 61276247 (+) |
| LOC110494281 | gnai2 | coding | upstream | 71449 | 61145511 ~ 61257368 (+) |
| LOC118940484 | NA | coding | upstream | 169313 | 61154895 ~ 61159504 (+) |
| LOC110494279 | LOC106565568 | coding | upstream | 199450 | 61054631 ~ 61129367 (+) |
| LOC110494276 | NA | coding | upstream | 285095 | 61039278 ~ 61043722 (+) |
| LOC110493231 | LOC106565565 | coding | downstream | 23813 | 61353485 ~ 61458471 (+) |
| LOC110494283 | LOC106565563 | coding | downstream | 226201 | 61555873 ~ 61558328 (+) |
| LOC110495182 | LOC106565603 | coding | downstream | 249967 | 61579639 ~ 61581869 (+) |
| trnaf-gaa-81 | NA | coding | downstream | 258719 | 61588391 ~ 61588463 (+) |
| LOC110494284 | LOC106565564 | coding | downstream | 347293 | 61676965 ~ 61684917 (+) |
| G1472260 | NA | non-coding | upstream | 4877 | 61323704 ~ 61323940 (+) |
| G1472219 | NA | non-coding | upstream | 34444 | 61294044 ~ 61294373 (+) |
| G1472215 | NA | non-coding | upstream | 37686 | 61290869 ~ 61291131 (+) |
| G1472211 | NA | non-coding | upstream | 39951 | 61288645 ~ 61288866 (+) |
| G1471921 | NA | non-coding | upstream | 60323 | 61268283 ~ 61268494 (+) |
| G1472264 | NA | non-coding | downstream | 675 | 61330347 ~ 61331244 (+) |
| G1472268 | NA | non-coding | downstream | 2412 | 61332084 ~ 61333232 (+) |
| G1472271 | NA | non-coding | downstream | 4495 | 61334167 ~ 61334495 (+) |
| G1472275 | NA | non-coding | downstream | 8331 | 61338003 ~ 61338410 (+) |
| G1472281 | NA | non-coding | downstream | 11460 | 61341132 ~ 61341435 (+) |
| G1471723 | LOC100380707 | other | upstream | 329754 | 60972478 ~ 60999063 (+) |
| G1470607 | NA | other | upstream | 1224810 | 60101892 ~ 60104007 (+) |
| G1469076 | NA | other | upstream | 2820932 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 3714517 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 3780639 | 57498305 ~ 57548178 (+) |
| G1473171 | LOC106581772 | other | downstream | 1368831 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 1380667 | 62710339 ~ 62711136 (+) |
| G1474159 | NA | other | downstream | 1887276 | 63216948 ~ 63217594 (+) |
| srsf3b | LOC106565658 | other | downstream | 2328772 | 63658373 ~ 63663255 (+) |
