G1472294


Basic Information

Item Value
gene id G1472294
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 61352885 ~ 61353103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1683850
cttatatggccCCTTCATTTATccgacggttctgacttggtgtacagggagaacactgtaagaatggcccatgttctgaattctgtcgctgtacatttcaaaagtgctgaagaAATCTCAATTGTCCGTAGAtaatttttttaaaggcagtaaaggAGGCTGAATTAGCTGTTTTGCTgtcagacaaggctctgctgatagccaggtgtacaGTAGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1683850 True 219 lncRNA 0.43 1 61352885 61353103

Neighbor

gene id symbol gene type direction distance location
LOC110494282 LOC106565567 coding upstream 76638 61270485 ~ 61276247 (+)
LOC110494281 gnai2 coding upstream 95517 61145511 ~ 61257368 (+)
LOC118940484 NA coding upstream 193381 61154895 ~ 61159504 (+)
LOC110494279 LOC106565568 coding upstream 223518 61054631 ~ 61129367 (+)
LOC110494276 NA coding upstream 309163 61039278 ~ 61043722 (+)
LOC110493231 LOC106565565 coding downstream 382 61353485 ~ 61458471 (+)
LOC110494283 LOC106565563 coding downstream 202770 61555873 ~ 61558328 (+)
LOC110495182 LOC106565603 coding downstream 226536 61579639 ~ 61581869 (+)
trnaf-gaa-81 NA coding downstream 235288 61588391 ~ 61588463 (+)
LOC110494284 LOC106565564 coding downstream 323862 61676965 ~ 61684917 (+)
G1472281 NA non-coding upstream 11450 61341132 ~ 61341435 (+)
G1472275 NA non-coding upstream 14475 61338003 ~ 61338410 (+)
G1472271 NA non-coding upstream 18390 61334167 ~ 61334495 (+)
G1472268 NA non-coding upstream 19653 61332084 ~ 61333232 (+)
G1472264 NA non-coding upstream 21641 61330347 ~ 61331244 (+)
G1472329 NA non-coding downstream 103033 61456136 ~ 61457003 (+)
G1472465 NA non-coding downstream 162811 61515914 ~ 61516113 (+)
G1472468 NA non-coding downstream 164989 61518092 ~ 61518375 (+)
G1472474 NA non-coding downstream 173157 61526260 ~ 61526571 (+)
G1471723 LOC100380707 other upstream 353822 60972478 ~ 60999063 (+)
G1470607 NA other upstream 1248878 60101892 ~ 60104007 (+)
G1469076 NA other upstream 2845000 58507297 ~ 58507885 (+)
G1467219 NA other upstream 3738585 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 3804707 57498305 ~ 57548178 (+)
G1473171 LOC106581772 other downstream 1345400 62698503 ~ 62698815 (+)
G1473177 NA other downstream 1357236 62710339 ~ 62711136 (+)
G1474159 NA other downstream 1863845 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 2305341 63658373 ~ 63663255 (+)

Expression


Co-expression Network