XLOC_003392 (BX296530.1)



Basic Information


Item Value
gene id XLOC_003392
gene name BX296530.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 18676442 ~ 18676557 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00006645
TAGCTGGAagctagctttctgcaactcttacatggtcgccCATTGAAGCTAAACAGGACTGCACCcggtcaatacctggatgggagaccacatgggaaagctaggtttgctgctgg

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000107785

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00006645 True 116 rRNA 0.52 1 18676442 18676557

Neighbor


gene id symbol gene type direction distance location
XLOC_003390 tmcc1b coding upstream 431881 18205766 ~ 18244561 (+)
XLOC_003389 LO018315.6 coding upstream 475741 18183220 ~ 18200701 (+)
XLOC_003388 zgc:173545 coding upstream 498943 18175893 ~ 18177499 (+)
XLOC_003387 zgc:173545 coding upstream 517559 18157260 ~ 18158883 (+)
XLOC_003386 zgc:175135 coding upstream 544376 18130300 ~ 18132066 (+)
XLOC_003393 NA coding downstream 25805 18702362 ~ 18708059 (+)
XLOC_003394 NA coding downstream 64470 18741027 ~ 18742103 (+)
XLOC_003395 CU207354.2 coding downstream 156356 18832913 ~ 18833246 (+)
XLOC_003396 magi1b coding downstream 196556 18873113 ~ 19091767 (+)
XLOC_003397 adamts9 coding downstream 481322 19157879 ~ 19227802 (+)
XLOC_003369 CR854846.2 misc upstream 2553360 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 5964446 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 5982179 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 5990843 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 5996414 12679732 ~ 12680028 (+)
XLOC_003381 NA non-coding upstream 712989 17956841 ~ 17963453 (+)
XLOC_003380 NA non-coding upstream 723884 17951563 ~ 17952558 (+)
XLOC_003379 NA non-coding upstream 744284 17930273 ~ 17932158 (+)
XLOC_003378 CR589944.3 non-coding upstream 756429 17919143 ~ 17920013 (+)
XLOC_003377 BX571952.1 non-coding upstream 1162810 17440591 ~ 17513632 (+)
XLOC_003402 BX276115.1 non-coding downstream 1356509 20033066 ~ 20033185 (+)
XLOC_003405 NA non-coding downstream 2211553 20888110 ~ 20890881 (+)

Expression



Co-expression Network