G1472474


Basic Information

Item Value
gene id G1472474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 61526260 ~ 61526571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1684043
gtactgaTGCACAGAGTCTAGAACCAACAGGTCCCTCaacagcttctgcccccaagccataagactactaaatAGTTTGTTAAATTGtgtgggtagctatttggtttactatctgcattgactcattttgcactaactcttttgactcgtcacatacgctgctgttactgtttattatttatCCTGTTTCCTaatcactttatccctacctacagtatatgcacatatctacctcaattaccttgtacccctgcacatcgactcggtactggtaccccatgtatatagccaagctatcattaatcattgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1684043 True 312 lncRNA 0.40 1 61526260 61526571

Neighbor

gene id symbol gene type direction distance location
LOC110493231 LOC106565565 coding upstream 67789 61353485 ~ 61458471 (+)
LOC110494282 LOC106565567 coding upstream 250013 61270485 ~ 61276247 (+)
LOC110494281 gnai2 coding upstream 268892 61145511 ~ 61257368 (+)
LOC118940484 NA coding upstream 366756 61154895 ~ 61159504 (+)
LOC110494279 LOC106565568 coding upstream 396893 61054631 ~ 61129367 (+)
LOC110494283 LOC106565563 coding downstream 29302 61555873 ~ 61558328 (+)
LOC110495182 LOC106565603 coding downstream 53068 61579639 ~ 61581869 (+)
trnaf-gaa-81 NA coding downstream 61820 61588391 ~ 61588463 (+)
LOC110494284 LOC106565564 coding downstream 150394 61676965 ~ 61684917 (+)
LOC110494287 NA coding downstream 182115 61708686 ~ 61714434 (+)
G1472468 NA non-coding upstream 7885 61518092 ~ 61518375 (+)
G1472465 NA non-coding upstream 10147 61515914 ~ 61516113 (+)
G1472329 NA non-coding upstream 69257 61456136 ~ 61457003 (+)
G1472294 NA non-coding upstream 173157 61352885 ~ 61353103 (+)
G1472477 NA non-coding downstream 5437 61532008 ~ 61532218 (+)
G1472482 NA non-coding downstream 10640 61537211 ~ 61537504 (+)
G1472492 NA non-coding downstream 22621 61549192 ~ 61549479 (+)
G1472493 NA non-coding downstream 23169 61549740 ~ 61549968 (+)
G1472499 NA non-coding downstream 42853 61569424 ~ 61569635 (+)
G1471723 LOC100380707 other upstream 527197 60972478 ~ 60999063 (+)
G1470607 NA other upstream 1422253 60101892 ~ 60104007 (+)
G1469076 NA other upstream 3018375 58507297 ~ 58507885 (+)
G1467219 NA other upstream 3911960 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 3978082 57498305 ~ 57548178 (+)
G1473171 LOC106581772 other downstream 1171932 62698503 ~ 62698815 (+)
G1473177 NA other downstream 1183768 62710339 ~ 62711136 (+)
G1474159 NA other downstream 1690377 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 2131873 63658373 ~ 63663255 (+)

Expression


Co-expression Network