G1472502


Basic Information

Item Value
gene id G1472502
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 61573310 ~ 61573539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1684071
ctttcacatgcactagaatagccacacagtcagataggatgctggagatcattttgatggataacacaagagggcaactgtagttgtgcaaagtttcagactgataacttcaggaatgggtgagctacatgacatttagcatgaagtcacccaggtgtcccacacaagttgcccaaatgtacccaagtggccaaattggtgaaatgacctataactatatacaacagtgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1684071 True 230 lncRNA 0.43 1 61573310 61573539

Neighbor

gene id symbol gene type direction distance location
LOC110494283 LOC106565563 coding upstream 14982 61555873 ~ 61558328 (+)
LOC110493231 LOC106565565 coding upstream 114839 61353485 ~ 61458471 (+)
LOC110494282 LOC106565567 coding upstream 297063 61270485 ~ 61276247 (+)
LOC110494281 gnai2 coding upstream 315942 61145511 ~ 61257368 (+)
LOC110495182 LOC106565603 coding downstream 6100 61579639 ~ 61581869 (+)
trnaf-gaa-81 NA coding downstream 14852 61588391 ~ 61588463 (+)
LOC110494284 LOC106565564 coding downstream 103426 61676965 ~ 61684917 (+)
LOC110494287 NA coding downstream 135147 61708686 ~ 61714434 (+)
LOC100135961 LOC100135961 coding downstream 150263 61723802 ~ 61727917 (+)
G1472500 NA non-coding upstream 1554 61570497 ~ 61571756 (+)
G1472499 NA non-coding upstream 3675 61569424 ~ 61569635 (+)
G1472493 NA non-coding upstream 23342 61549740 ~ 61549968 (+)
G1472492 NA non-coding upstream 23831 61549192 ~ 61549479 (+)
G1472482 NA non-coding upstream 35806 61537211 ~ 61537504 (+)
G1472504 NA non-coding downstream 2660 61576199 ~ 61576649 (+)
G1472510 NA non-coding downstream 10659 61584198 ~ 61584969 (+)
G1472512 NA non-coding downstream 14328 61587867 ~ 61588136 (+)
G1472515 NA non-coding downstream 20536 61594075 ~ 61594284 (+)
G1472519 NA non-coding downstream 24779 61598318 ~ 61598545 (+)
G1471723 LOC100380707 other upstream 574247 60972478 ~ 60999063 (+)
G1470607 NA other upstream 1469303 60101892 ~ 60104007 (+)
G1469076 NA other upstream 3065425 58507297 ~ 58507885 (+)
G1467219 NA other upstream 3959010 57589865 ~ 57614300 (+)
G1473171 LOC106581772 other downstream 1124964 62698503 ~ 62698815 (+)
G1473177 NA other downstream 1136800 62710339 ~ 62711136 (+)
G1474159 NA other downstream 1643409 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 2084905 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 2110551 63684043 ~ 63691033 (+)

Expression


Co-expression Network