G1472519


Basic Information

Item Value
gene id G1472519
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 61598318 ~ 61598545 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1684090
TGCATTCCTACAGAGCCATTTGTTAAATGTCAAGTAGTGTTGATATTCAGAGTGGATTTAAATGTCACACAATGGTCTGAGTGGCTAAATCAGCAAAGCGAGTGGCGAGGACAGGATGAACCATCCGTTTCCTTCAGCAGATGCCCTTAATAGGCCCACCTCCTCATAAACCCTATATCTGAATACACTTCCTTTATCGTGCATCTGGTAGAATGAACTTGTGTAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1684090 True 228 lncRNA 0.43 1 61598318 61598545

Neighbor

gene id symbol gene type direction distance location
trnaf-gaa-81 NA coding upstream 9855 61588391 ~ 61588463 (+)
LOC110495182 LOC106565603 coding upstream 16449 61579639 ~ 61581869 (+)
LOC110494283 LOC106565563 coding upstream 39990 61555873 ~ 61558328 (+)
LOC110493231 LOC106565565 coding upstream 139847 61353485 ~ 61458471 (+)
LOC110494282 LOC106565567 coding upstream 322071 61270485 ~ 61276247 (+)
LOC110494284 LOC106565564 coding downstream 78420 61676965 ~ 61684917 (+)
LOC110494287 NA coding downstream 110141 61708686 ~ 61714434 (+)
LOC100135961 LOC100135961 coding downstream 125257 61723802 ~ 61727917 (+)
LOC110494288 LOC106565560 coding downstream 131592 61730137 ~ 61734872 (+)
LOC110495184 NA coding downstream 146407 61744952 ~ 61746038 (+)
G1472515 NA non-coding upstream 4034 61594075 ~ 61594284 (+)
G1472512 NA non-coding upstream 10182 61587867 ~ 61588136 (+)
G1472510 NA non-coding upstream 13349 61584198 ~ 61584969 (+)
G1472504 NA non-coding upstream 21669 61576199 ~ 61576649 (+)
G1472502 NA non-coding upstream 24779 61573310 ~ 61573539 (+)
G1472595 NA non-coding downstream 94384 61692929 ~ 61755557 (+)
G1472611 NA non-coding downstream 105063 61703608 ~ 61704013 (+)
LOC110494291 NA non-coding downstream 214036 61809932 ~ 61813656 (+)
G1472696 LOC103358720 non-coding downstream 261802 61860347 ~ 61865508 (+)
G1471723 LOC100380707 other upstream 599255 60972478 ~ 60999063 (+)
G1470607 NA other upstream 1494311 60101892 ~ 60104007 (+)
G1469076 NA other upstream 3090433 58507297 ~ 58507885 (+)
G1467219 NA other upstream 3984018 57589865 ~ 57614300 (+)
G1473171 LOC106581772 other downstream 1099958 62698503 ~ 62698815 (+)
G1473177 NA other downstream 1111794 62710339 ~ 62711136 (+)
G1474159 NA other downstream 1618403 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 2059899 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 2085545 63684043 ~ 63691033 (+)

Expression


Co-expression Network