Gene
RNA
| Item | Value |
|---|---|
| gene id | G1472883 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 62214323 ~ 62215572 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1684491 | True | 310 | lncRNA | 0.54 | 2 | 62214323 | 62215572 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494300 | ruvb1 | coding | upstream | 142399 | 62062599 ~ 62071924 (+) |
| LOC110494299 | LOC106565550 | coding | upstream | 280476 | 61921680 ~ 61933847 (+) |
| si:ch211-157b11.8 | LOC106565551 | coding | upstream | 320130 | 61887592 ~ 61894193 (+) |
| LOC110494292 | LOC106565557 | coding | upstream | 363298 | 61816490 ~ 61851025 (+) |
| LOC110494291 | NA | coding | upstream | 400667 | 61809932 ~ 61813656 (+) |
| LOC110494308 | LOC106565540 | coding | downstream | 67283 | 62282838 ~ 62286838 (+) |
| LOC110494317 | LOC106565535 | coding | downstream | 189841 | 62405413 ~ 62417692 (+) |
| LOC110493234 | NA | coding | downstream | 210972 | 62426544 ~ 62433065 (+) |
| LOC110494314 | LOC106565532 | coding | downstream | 256359 | 62471931 ~ 62491150 (+) |
| LOC110494318 | rheb | coding | downstream | 276399 | 62491971 ~ 62496531 (+) |
| G1472762 | NA | non-coding | upstream | 101595 | 62028290 ~ 62112728 (+) |
| G1472820 | NA | non-coding | upstream | 106887 | 62106012 ~ 62107436 (+) |
| G1472701 | NA | non-coding | upstream | 273846 | 61878581 ~ 61940477 (+) |
| G1472625 | LOC106565554 | non-coding | upstream | 315815 | 61867645 ~ 61898508 (+) |
| G1472696 | LOC103358720 | non-coding | upstream | 348815 | 61860347 ~ 61865508 (+) |
| G1472961 | LOC106565537 | non-coding | downstream | 141350 | 62356922 ~ 62359002 (+) |
| G1472966 | LOC106565537 | non-coding | downstream | 152271 | 62367843 ~ 62370614 (+) |
| G1473067 | NA | non-coding | downstream | 336228 | 62551800 ~ 62552243 (+) |
| G1473082 | NA | non-coding | downstream | 350177 | 62565749 ~ 62566066 (+) |
| LOC110494283 | LOC106565563 | other | upstream | 657285 | 61555873 ~ 61558328 (+) |
| G1471723 | LOC100380707 | other | upstream | 1215260 | 60972478 ~ 60999063 (+) |
| G1470607 | NA | other | upstream | 2110316 | 60101892 ~ 60104007 (+) |
| G1469076 | NA | other | upstream | 3706438 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 4600023 | 57589865 ~ 57614300 (+) |
| G1473171 | LOC106581772 | other | downstream | 482931 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 494767 | 62710339 ~ 62711136 (+) |
| G1474159 | NA | other | downstream | 1001376 | 63216948 ~ 63217594 (+) |
| srsf3b | LOC106565658 | other | downstream | 1442872 | 63658373 ~ 63663255 (+) |
| tmcc2 | LOC106565656 | other | downstream | 1468518 | 63684043 ~ 63691033 (+) |
