G1473734


Basic Information

Item Value
gene id G1473734
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 62504479 ~ 62505046 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1685441
cGGAAAATACAGcgtgtaggggttggtaatgatCTCTAGTTGCGTTGTGATTTGCTCTGTGCTCTGTCACTCacggggacactacgtcaccgcaaaatctacgggtagagctagaaaattcaagccccttgggtgctgccatagttacattagaagtgcccatccgtGAAGGCTCAAGATCATTGGCCatagataaaatgacgtcaaatcacattatatctaccgtagctttgattggactgatcatgtcaacatcatactttcaaaatcttagctagcaagctagcagtcatcatcatgaatcaagttgacaatctactgggaAATCCTTTTCAAATGAAGGGAAAtgatgaagagaaattatagataaaacgtaccggtgctcatcggccattggacacaacaagttggaaattgcaaattcaacaataagttgtttggaaggaatcagtggctaactgcaagcattacaATGCCTGCTATTCAGTGTAGTGGGTGTGTGGTCGAATTCTGgcattaagggtctcttttccaagcttaaaaggataaacattcaacattggccatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1685441 True 568 lncRNA 0.42 1 62504479 62505046

Neighbor

gene id symbol gene type direction distance location
LOC110494312 LOC106565533 coding downstream 45894 62437815 ~ 62458585 (-)
LOC110494311 LOC106565537 coding downstream 112573 62356878 ~ 62391906 (-)
LOC110494315 LOC106565538 coding downstream 152763 62333800 ~ 62351716 (-)
LOC110494310 NA coding downstream 175265 62327517 ~ 62329214 (-)
crbn crbn coding downstream 179902 62306845 ~ 62324577 (-)
LOC110494313 LOC106565530 coding upstream 26033 62531079 ~ 62549639 (-)
LOC110493235 LOC106565607 coding upstream 48932 62553978 ~ 62560017 (-)
LOC110495185 LOC106565606 coding upstream 145642 62650688 ~ 62653187 (-)
LOC110494320 LOC106565528 coding upstream 164169 62669215 ~ 62695066 (-)
LOC110494324 gpr84 coding upstream 335230 62840276 ~ 62845145 (-)
LOC110494301 LOC106565546 non-coding downstream 422236 62081247 ~ 62100547 (-)
G1473420 LOC106565550 non-coding downstream 576734 61923577 ~ 61927745 (-)
G1473389 NA non-coding downstream 652949 61817749 ~ 61851530 (-)
G1473385 NA non-coding downstream 691489 61811412 ~ 61812990 (-)
G1473767 NA non-coding upstream 69688 62574734 ~ 62574962 (-)
G1473803 NA non-coding upstream 124722 62629768 ~ 62630862 (-)
G1473816 NA non-coding upstream 154268 62659314 ~ 62659639 (-)
G1473840 NA non-coding upstream 195948 62700994 ~ 62701250 (-)
ccdc174 NA other downstream 253841 62246379 ~ 62250654 (-)
G1471564 NA other downstream 1865144 60638180 ~ 60639335 (-)
G1471219 srgap3 other downstream 2127887 60375633 ~ 60376864 (-)
LOC110494257 LOC106565586 other downstream 2397292 60104033 ~ 60110249 (-)
LOC110494253 LOC106565590 other downstream 2508153 59990975 ~ 59999740 (-)
G1473866 NA other upstream 225107 62730153 ~ 62730503 (-)
G1474395 NA other upstream 543593 63048639 ~ 63100752 (-)
G1474425 LOC106565679 other upstream 628779 63133825 ~ 63145087 (-)
LOC110494346 LOC106565668 other upstream 901859 63403851 ~ 63409818 (-)
G1474741 LOC100136012 other upstream 1005070 63510116 ~ 63510543 (-)

Expression


Co-expression Network