Gene
RNA
| Item | Value |
|---|---|
| gene id | G1473067 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 62551800 ~ 62552243 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1684701 | True | 444 | lncRNA | 0.32 | 1 | 62551800 | 62552243 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136666 | LOC100136666 | coding | upstream | 23161 | 62506856 ~ 62528639 (+) |
| LOC110494318 | rheb | coding | upstream | 55269 | 62491971 ~ 62496531 (+) |
| LOC110494314 | LOC106565532 | coding | upstream | 60650 | 62471931 ~ 62491150 (+) |
| LOC110493234 | NA | coding | upstream | 118735 | 62426544 ~ 62433065 (+) |
| LOC110494317 | LOC106565535 | coding | upstream | 134108 | 62405413 ~ 62417692 (+) |
| LOC110494319 | LOC106565529 | coding | downstream | 23742 | 62575985 ~ 62649525 (+) |
| LOC110493236 | LOC106583228 | coding | downstream | 195528 | 62747771 ~ 62760165 (+) |
| c1galt1b | LOC106565526 | coding | downstream | 211239 | 62763482 ~ 62774441 (+) |
| LOC110494322 | LOC106565525 | coding | downstream | 255414 | 62807657 ~ 62812224 (+) |
| stat2 | stat2 | coding | downstream | 274325 | 62826568 ~ 62839920 (+) |
| G1472966 | LOC106565537 | non-coding | upstream | 181186 | 62367843 ~ 62370614 (+) |
| G1472961 | LOC106565537 | non-coding | upstream | 192798 | 62356922 ~ 62359002 (+) |
| LOC110494308 | LOC106565540 | non-coding | upstream | 268400 | 62282838 ~ 62286838 (+) |
| G1472883 | NA | non-coding | upstream | 336228 | 62214323 ~ 62215572 (+) |
| G1472762 | NA | non-coding | upstream | 439072 | 62028290 ~ 62112728 (+) |
| G1473082 | NA | non-coding | downstream | 13506 | 62565749 ~ 62566066 (+) |
| G1473083 | NA | non-coding | downstream | 13851 | 62566094 ~ 62566299 (+) |
| G1473085 | NA | non-coding | downstream | 15977 | 62568220 ~ 62568458 (+) |
| G1473120 | NA | non-coding | downstream | 58894 | 62611137 ~ 62611843 (+) |
| G1473134 | NA | non-coding | downstream | 73162 | 62625405 ~ 62629117 (+) |
| LOC110494283 | LOC106565563 | other | upstream | 994762 | 61555873 ~ 61558328 (+) |
| G1471723 | LOC100380707 | other | upstream | 1552737 | 60972478 ~ 60999063 (+) |
| G1470607 | NA | other | upstream | 2447793 | 60101892 ~ 60104007 (+) |
| G1469076 | NA | other | upstream | 4043915 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 4937500 | 57589865 ~ 57614300 (+) |
| G1473171 | LOC106581772 | other | downstream | 146260 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 158096 | 62710339 ~ 62711136 (+) |
| G1474159 | NA | other | downstream | 664705 | 63216948 ~ 63217594 (+) |
| srsf3b | LOC106565658 | other | downstream | 1106201 | 63658373 ~ 63663255 (+) |
| tmcc2 | LOC106565656 | other | downstream | 1131847 | 63684043 ~ 63691033 (+) |
