Gene
RNA
| Item | Value |
|---|---|
| gene id | G1473767 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 62574734 ~ 62574962 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1685478 | True | 229 | lncRNA | 0.41 | 1 | 62574734 | 62574962 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493235 | LOC106565607 | coding | downstream | 14717 | 62553978 ~ 62560017 (-) |
| LOC110494313 | LOC106565530 | coding | downstream | 25095 | 62531079 ~ 62549639 (-) |
| LOC110494312 | LOC106565533 | coding | downstream | 116149 | 62437815 ~ 62458585 (-) |
| LOC110494311 | LOC106565537 | coding | downstream | 182828 | 62356878 ~ 62391906 (-) |
| LOC110494315 | LOC106565538 | coding | downstream | 223018 | 62333800 ~ 62351716 (-) |
| LOC110495185 | LOC106565606 | coding | upstream | 75726 | 62650688 ~ 62653187 (-) |
| LOC110494320 | LOC106565528 | coding | upstream | 94253 | 62669215 ~ 62695066 (-) |
| LOC110494324 | gpr84 | coding | upstream | 265314 | 62840276 ~ 62845145 (-) |
| LOC110494325 | LOC106565522 | coding | upstream | 274007 | 62848969 ~ 62918172 (-) |
| LOC110494326 | LOC106565520 | coding | upstream | 360401 | 62935363 ~ 62939851 (-) |
| G1473734 | NA | non-coding | downstream | 69688 | 62504479 ~ 62505046 (-) |
| LOC110494310 | NA | non-coding | downstream | 245594 | 62327517 ~ 62329214 (-) |
| LOC110494301 | LOC106565546 | non-coding | downstream | 492491 | 62081247 ~ 62100547 (-) |
| G1473420 | LOC106565550 | non-coding | downstream | 646989 | 61923577 ~ 61927745 (-) |
| G1473389 | NA | non-coding | downstream | 723204 | 61817749 ~ 61851530 (-) |
| G1473803 | NA | non-coding | upstream | 54806 | 62629768 ~ 62630862 (-) |
| G1473816 | NA | non-coding | upstream | 84352 | 62659314 ~ 62659639 (-) |
| G1473840 | NA | non-coding | upstream | 126032 | 62700994 ~ 62701250 (-) |
| G1473841 | NA | non-coding | upstream | 127384 | 62702346 ~ 62702636 (-) |
| ccdc174 | NA | other | downstream | 324096 | 62246379 ~ 62250654 (-) |
| G1471564 | NA | other | downstream | 1935399 | 60638180 ~ 60639335 (-) |
| G1471219 | srgap3 | other | downstream | 2198142 | 60375633 ~ 60376864 (-) |
| LOC110494257 | LOC106565586 | other | downstream | 2467547 | 60104033 ~ 60110249 (-) |
| LOC110494253 | LOC106565590 | other | downstream | 2578408 | 59990975 ~ 59999740 (-) |
| G1473866 | NA | other | upstream | 155191 | 62730153 ~ 62730503 (-) |
| G1474395 | NA | other | upstream | 473677 | 63048639 ~ 63100752 (-) |
| G1474425 | LOC106565679 | other | upstream | 558863 | 63133825 ~ 63145087 (-) |
| LOC110494346 | LOC106565668 | other | upstream | 831943 | 63403851 ~ 63409818 (-) |
| G1474741 | LOC100136012 | other | upstream | 935154 | 63510116 ~ 63510543 (-) |
