G1473120


Basic Information

Item Value
gene id G1473120
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 62611137 ~ 62611843 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1684758
CACTgttcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcactgctcttaatagtatcactgttcttgatagtatcactgttcttgatagtatcactgctcttgatagtatcactgttcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcactgttcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcactgttcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcactgctcttgatagtatcacttctcttgatagtatcactgctcttgatagtatcactgctcttgatagtattaCTGTTCTTTAATGAGCTTTACGTATCGGTACAGATGTTGTACCCAGTGATTTATGAAAACTTGCTTGATGGGTCGATGTCCTCATTGTGGATTTACAGgcgtatttaatacattttatgtaCACACGTTAGAATATTTATGTAATGc

Function

NR:

description
PREDICTED: adhesive plaque matrix protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1684758 True 653 lncRNA 0.37 2 62611137 62611843

Neighbor

gene id symbol gene type direction distance location
LOC100136666 LOC100136666 coding upstream 82498 62506856 ~ 62528639 (+)
LOC110494318 rheb coding upstream 114606 62491971 ~ 62496531 (+)
LOC110494314 LOC106565532 coding upstream 119987 62471931 ~ 62491150 (+)
LOC110493234 NA coding upstream 178072 62426544 ~ 62433065 (+)
LOC110494317 LOC106565535 coding upstream 193445 62405413 ~ 62417692 (+)
LOC110493236 LOC106583228 coding downstream 135928 62747771 ~ 62760165 (+)
c1galt1b LOC106565526 coding downstream 151639 62763482 ~ 62774441 (+)
LOC110494322 LOC106565525 coding downstream 195814 62807657 ~ 62812224 (+)
stat2 stat2 coding downstream 214725 62826568 ~ 62839920 (+)
tsfm LOC106565519 coding downstream 344881 62956724 ~ 62958969 (+)
G1473085 NA non-coding upstream 42679 62568220 ~ 62568458 (+)
G1473083 NA non-coding upstream 44838 62566094 ~ 62566299 (+)
G1473082 NA non-coding upstream 45071 62565749 ~ 62566066 (+)
G1473067 NA non-coding upstream 58894 62551800 ~ 62552243 (+)
G1472966 LOC106565537 non-coding upstream 240523 62367843 ~ 62370614 (+)
G1473134 NA non-coding downstream 13562 62625405 ~ 62629117 (+)
G1473143 NA non-coding downstream 38767 62650610 ~ 62650873 (+)
G1473151 NA non-coding downstream 47675 62659518 ~ 62659787 (+)
G1473153 NA non-coding downstream 49137 62660980 ~ 62661211 (+)
G1473121 NA non-coding downstream 52131 62663974 ~ 62667680 (+)
LOC110494283 LOC106565563 other upstream 1054099 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 1612074 60972478 ~ 60999063 (+)
G1470607 NA other upstream 2507130 60101892 ~ 60104007 (+)
G1469076 NA other upstream 4103252 58507297 ~ 58507885 (+)
G1467219 NA other upstream 4996837 57589865 ~ 57614300 (+)
G1473171 LOC106581772 other downstream 86660 62698503 ~ 62698815 (+)
G1473177 NA other downstream 98496 62710339 ~ 62711136 (+)
G1474159 NA other downstream 605105 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 1046601 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 1072247 63684043 ~ 63691033 (+)

Expression


Co-expression Network