Gene
RNA
| Item | Value |
|---|---|
| gene id | G1473816 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 62659314 ~ 62659639 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1685532 | True | 326 | lncRNA | 0.40 | 1 | 62659314 | 62659639 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495185 | LOC106565606 | coding | downstream | 6127 | 62650688 ~ 62653187 (-) |
| LOC110493235 | LOC106565607 | coding | downstream | 99297 | 62553978 ~ 62560017 (-) |
| LOC110494313 | LOC106565530 | coding | downstream | 109675 | 62531079 ~ 62549639 (-) |
| LOC110494312 | LOC106565533 | coding | downstream | 200729 | 62437815 ~ 62458585 (-) |
| LOC110494311 | LOC106565537 | coding | downstream | 267408 | 62356878 ~ 62391906 (-) |
| LOC110494320 | LOC106565528 | coding | upstream | 9576 | 62669215 ~ 62695066 (-) |
| LOC110494324 | gpr84 | coding | upstream | 180637 | 62840276 ~ 62845145 (-) |
| LOC110494325 | LOC106565522 | coding | upstream | 189330 | 62848969 ~ 62918172 (-) |
| LOC110494326 | LOC106565520 | coding | upstream | 275724 | 62935363 ~ 62939851 (-) |
| LOC110493237 | endou | coding | upstream | 282109 | 62941748 ~ 62950451 (-) |
| G1473803 | NA | non-coding | downstream | 28452 | 62629768 ~ 62630862 (-) |
| G1473767 | NA | non-coding | downstream | 84352 | 62574734 ~ 62574962 (-) |
| G1473734 | NA | non-coding | downstream | 154268 | 62504479 ~ 62505046 (-) |
| LOC110494310 | NA | non-coding | downstream | 330174 | 62327517 ~ 62329214 (-) |
| G1473840 | NA | non-coding | upstream | 41355 | 62700994 ~ 62701250 (-) |
| G1473841 | NA | non-coding | upstream | 42707 | 62702346 ~ 62702636 (-) |
| G1473844 | NA | non-coding | upstream | 49377 | 62709016 ~ 62709613 (-) |
| G1473845 | NA | non-coding | upstream | 50016 | 62709655 ~ 62710091 (-) |
| G1473847 | NA | non-coding | upstream | 52050 | 62711689 ~ 62711942 (-) |
| ccdc174 | NA | other | downstream | 408676 | 62246379 ~ 62250654 (-) |
| G1471564 | NA | other | downstream | 2019979 | 60638180 ~ 60639335 (-) |
| G1471219 | srgap3 | other | downstream | 2282722 | 60375633 ~ 60376864 (-) |
| LOC110494257 | LOC106565586 | other | downstream | 2552127 | 60104033 ~ 60110249 (-) |
| LOC110494253 | LOC106565590 | other | downstream | 2662988 | 59990975 ~ 59999740 (-) |
| G1473866 | NA | other | upstream | 70514 | 62730153 ~ 62730503 (-) |
| G1474395 | NA | other | upstream | 389000 | 63048639 ~ 63100752 (-) |
| G1474425 | LOC106565679 | other | upstream | 474186 | 63133825 ~ 63145087 (-) |
| LOC110494346 | LOC106565668 | other | upstream | 747266 | 63403851 ~ 63409818 (-) |
| G1474741 | LOC100136012 | other | upstream | 850477 | 63510116 ~ 63510543 (-) |
