Gene
RNA
| Item | Value |
|---|---|
| gene id | G1473151 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 62659518 ~ 62659787 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1684789 | True | 270 | lncRNA | 0.40 | 1 | 62659518 | 62659787 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494319 | LOC106565529 | coding | upstream | 9993 | 62575985 ~ 62649525 (+) |
| LOC100136666 | LOC100136666 | coding | upstream | 130879 | 62506856 ~ 62528639 (+) |
| LOC110494318 | rheb | coding | upstream | 162987 | 62491971 ~ 62496531 (+) |
| LOC110494314 | LOC106565532 | coding | upstream | 168368 | 62471931 ~ 62491150 (+) |
| LOC110493234 | NA | coding | upstream | 226453 | 62426544 ~ 62433065 (+) |
| LOC110493236 | LOC106583228 | coding | downstream | 87984 | 62747771 ~ 62760165 (+) |
| c1galt1b | LOC106565526 | coding | downstream | 103695 | 62763482 ~ 62774441 (+) |
| LOC110494322 | LOC106565525 | coding | downstream | 147870 | 62807657 ~ 62812224 (+) |
| stat2 | stat2 | coding | downstream | 166781 | 62826568 ~ 62839920 (+) |
| tsfm | LOC106565519 | coding | downstream | 296937 | 62956724 ~ 62958969 (+) |
| G1473143 | NA | non-coding | upstream | 8645 | 62650610 ~ 62650873 (+) |
| G1473134 | NA | non-coding | upstream | 30401 | 62625405 ~ 62629117 (+) |
| G1473120 | NA | non-coding | upstream | 47675 | 62611137 ~ 62611843 (+) |
| G1473085 | NA | non-coding | upstream | 91060 | 62568220 ~ 62568458 (+) |
| G1473083 | NA | non-coding | upstream | 93219 | 62566094 ~ 62566299 (+) |
| G1473153 | NA | non-coding | downstream | 1193 | 62660980 ~ 62661211 (+) |
| G1473121 | NA | non-coding | downstream | 4187 | 62663974 ~ 62667680 (+) |
| G1473168 | NA | non-coding | downstream | 41190 | 62700977 ~ 62701275 (+) |
| G1473174 | NA | non-coding | downstream | 45014 | 62704801 ~ 62705045 (+) |
| G1473853 | NA | non-coding | downstream | 62611 | 62722398 ~ 62722636 (+) |
| LOC110494283 | LOC106565563 | other | upstream | 1102480 | 61555873 ~ 61558328 (+) |
| G1471723 | LOC100380707 | other | upstream | 1660455 | 60972478 ~ 60999063 (+) |
| G1470607 | NA | other | upstream | 2555511 | 60101892 ~ 60104007 (+) |
| G1469076 | NA | other | upstream | 4151633 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 5045218 | 57589865 ~ 57614300 (+) |
| G1473171 | LOC106581772 | other | downstream | 38716 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 50552 | 62710339 ~ 62711136 (+) |
| G1474159 | NA | other | downstream | 557161 | 63216948 ~ 63217594 (+) |
| srsf3b | LOC106565658 | other | downstream | 998657 | 63658373 ~ 63663255 (+) |
| tmcc2 | LOC106565656 | other | downstream | 1024303 | 63684043 ~ 63691033 (+) |
