G1473171 (LOC106581772)


Basic Information

Item Value
gene id G1473171
gene name LOC106581772
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 62698503 ~ 62698815 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1684810
catttggccattatgagtacctcgtcatgccgtacgggttaaagaatgctccagctaTCTTTCAATCCTTCGTGGATGAGATTCTCAGAGACCTGCACGGACAGGGTATGGTAGTGTATATTGACGATATTTTGATCTACTCCGCTACACgcaccgcgcatgtgtctctggtgcgcaaggttcttgggcgactgctggagcatgacctgtatgtgaaggcggagaaatgtgagttttccaaacgagccgtttccttcctgggttatcgcatttccagctcgggggtggtaatggagggtgaccgcatcaaggc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106581772, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1684810 True 313 TUCP 0.51 1 62698503 62698815

Neighbor

gene id symbol gene type direction distance location
LOC110494319 LOC106565529 coding upstream 48978 62575985 ~ 62649525 (+)
LOC100136666 LOC100136666 coding upstream 169864 62506856 ~ 62528639 (+)
LOC110494318 rheb coding upstream 201972 62491971 ~ 62496531 (+)
LOC110494314 LOC106565532 coding upstream 207353 62471931 ~ 62491150 (+)
LOC110493234 NA coding upstream 265438 62426544 ~ 62433065 (+)
LOC110493236 LOC106583228 coding downstream 48956 62747771 ~ 62760165 (+)
c1galt1b LOC106565526 coding downstream 64667 62763482 ~ 62774441 (+)
LOC110494322 LOC106565525 coding downstream 108842 62807657 ~ 62812224 (+)
stat2 stat2 coding downstream 127753 62826568 ~ 62839920 (+)
tsfm LOC106565519 coding downstream 257909 62956724 ~ 62958969 (+)
G1473121 NA non-coding upstream 30823 62663974 ~ 62667680 (+)
G1473153 NA non-coding upstream 37292 62660980 ~ 62661211 (+)
G1473151 NA non-coding upstream 38716 62659518 ~ 62659787 (+)
G1473143 NA non-coding upstream 47630 62650610 ~ 62650873 (+)
G1473134 NA non-coding upstream 69386 62625405 ~ 62629117 (+)
G1473168 NA non-coding downstream 2162 62700977 ~ 62701275 (+)
G1473174 NA non-coding downstream 5986 62704801 ~ 62705045 (+)
G1473853 NA non-coding downstream 23583 62722398 ~ 62722636 (+)
G1473860 NA non-coding downstream 27727 62726542 ~ 62727202 (+)
G1473863 NA non-coding downstream 29493 62728308 ~ 62728638 (+)
LOC110494283 LOC106565563 other upstream 1141465 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 1699440 60972478 ~ 60999063 (+)
G1470607 NA other upstream 2594496 60101892 ~ 60104007 (+)
G1469076 NA other upstream 4190618 58507297 ~ 58507885 (+)
G1467219 NA other upstream 5084203 57589865 ~ 57614300 (+)
G1473177 NA other downstream 11524 62710339 ~ 62711136 (+)
G1474159 NA other downstream 518133 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 959629 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 985275 63684043 ~ 63691033 (+)
G1475820 NA other downstream 1864559 64563374 ~ 64565146 (+)

Expression


Co-expression Network