G1473853


Basic Information

Item Value
gene id G1473853
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 62722398 ~ 62722636 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1685571
cgggttcttcgctggccatgtcagaacactgacattcctgtcttgcaggaaatcacgcactgaatgagcagtatggctggtggtattgtcatgctggagggtcatgttaggatgagcctgcaggaagggtaccacatgagggaggaggatgtcttccctgtaacacacagcattgagacgcctgcaatgaaaacaagctcagttcgatgatgctgtgacacaccaccccagactatgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1685571 True 239 lncRNA 0.51 1 62722398 62722636

Neighbor

gene id symbol gene type direction distance location
LOC110494319 LOC106565529 coding upstream 72873 62575985 ~ 62649525 (+)
LOC100136666 LOC100136666 coding upstream 193759 62506856 ~ 62528639 (+)
LOC110494318 rheb coding upstream 225867 62491971 ~ 62496531 (+)
LOC110494314 LOC106565532 coding upstream 231248 62471931 ~ 62491150 (+)
LOC110493234 NA coding upstream 289333 62426544 ~ 62433065 (+)
LOC110493236 LOC106583228 coding downstream 25135 62747771 ~ 62760165 (+)
c1galt1b LOC106565526 coding downstream 40846 62763482 ~ 62774441 (+)
LOC110494322 LOC106565525 coding downstream 85021 62807657 ~ 62812224 (+)
stat2 stat2 coding downstream 103932 62826568 ~ 62839920 (+)
tsfm LOC106565519 coding downstream 234088 62956724 ~ 62958969 (+)
G1473174 NA non-coding upstream 17353 62704801 ~ 62705045 (+)
G1473168 NA non-coding upstream 21123 62700977 ~ 62701275 (+)
G1473121 NA non-coding upstream 54718 62663974 ~ 62667680 (+)
G1473153 NA non-coding upstream 61187 62660980 ~ 62661211 (+)
G1473151 NA non-coding upstream 62611 62659518 ~ 62659787 (+)
G1473860 NA non-coding downstream 3906 62726542 ~ 62727202 (+)
G1473863 NA non-coding downstream 5672 62728308 ~ 62728638 (+)
G1473885 NA non-coding downstream 21621 62744257 ~ 62744563 (+)
G1473901 LOC100194703 non-coding downstream 33374 62756010 ~ 62756470 (+)
G1473177 NA other upstream 11262 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 23583 62698503 ~ 62698815 (+)
LOC110494283 LOC106565563 other upstream 1165360 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 1723335 60972478 ~ 60999063 (+)
G1470607 NA other upstream 2618391 60101892 ~ 60104007 (+)
G1474159 NA other downstream 494312 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 935808 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 961454 63684043 ~ 63691033 (+)
G1475820 NA other downstream 1840738 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 1885618 64608194 ~ 64625111 (+)

Expression


Co-expression Network