Gene
RNA
| Item | Value |
|---|---|
| gene id | G1473885 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 62744257 ~ 62744563 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106585657 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1685604 | True | 307 | lncRNA | 0.46 | 1 | 62744257 | 62744563 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494319 | LOC106565529 | coding | upstream | 94732 | 62575985 ~ 62649525 (+) |
| LOC100136666 | LOC100136666 | coding | upstream | 215618 | 62506856 ~ 62528639 (+) |
| LOC110494318 | rheb | coding | upstream | 247726 | 62491971 ~ 62496531 (+) |
| LOC110494314 | LOC106565532 | coding | upstream | 253107 | 62471931 ~ 62491150 (+) |
| LOC110493234 | NA | coding | upstream | 311192 | 62426544 ~ 62433065 (+) |
| LOC110493236 | LOC106583228 | coding | downstream | 3208 | 62747771 ~ 62760165 (+) |
| c1galt1b | LOC106565526 | coding | downstream | 18919 | 62763482 ~ 62774441 (+) |
| LOC110494322 | LOC106565525 | coding | downstream | 63094 | 62807657 ~ 62812224 (+) |
| stat2 | stat2 | coding | downstream | 82005 | 62826568 ~ 62839920 (+) |
| tsfm | LOC106565519 | coding | downstream | 212161 | 62956724 ~ 62958969 (+) |
| G1473863 | NA | non-coding | upstream | 15619 | 62728308 ~ 62728638 (+) |
| G1473860 | NA | non-coding | upstream | 17055 | 62726542 ~ 62727202 (+) |
| G1473853 | NA | non-coding | upstream | 21621 | 62722398 ~ 62722636 (+) |
| G1473174 | NA | non-coding | upstream | 39212 | 62704801 ~ 62705045 (+) |
| G1473168 | NA | non-coding | upstream | 42982 | 62700977 ~ 62701275 (+) |
| G1473901 | LOC100194703 | non-coding | downstream | 11447 | 62756010 ~ 62756470 (+) |
| G1473920 | NA | non-coding | downstream | 17220 | 62761783 ~ 62762223 (+) |
| G1473921 | NA | non-coding | downstream | 18246 | 62762809 ~ 62763078 (+) |
| G1473927 | NA | non-coding | downstream | 25984 | 62770547 ~ 62770913 (+) |
| G1473177 | NA | other | upstream | 33121 | 62710339 ~ 62711136 (+) |
| G1473171 | LOC106581772 | other | upstream | 45442 | 62698503 ~ 62698815 (+) |
| LOC110494283 | LOC106565563 | other | upstream | 1187219 | 61555873 ~ 61558328 (+) |
| G1471723 | LOC100380707 | other | upstream | 1745194 | 60972478 ~ 60999063 (+) |
| G1470607 | NA | other | upstream | 2640250 | 60101892 ~ 60104007 (+) |
| G1474159 | NA | other | downstream | 472385 | 63216948 ~ 63217594 (+) |
| srsf3b | LOC106565658 | other | downstream | 913881 | 63658373 ~ 63663255 (+) |
| tmcc2 | LOC106565656 | other | downstream | 939527 | 63684043 ~ 63691033 (+) |
| G1475820 | NA | other | downstream | 1818811 | 64563374 ~ 64565146 (+) |
| LOC110494386 | LOC106565630 | other | downstream | 1863691 | 64608194 ~ 64625111 (+) |
