Gene
RNA
| Item | Value |
|---|---|
| gene id | G1473928 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 62778852 ~ 62779087 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1685651 | True | 236 | lncRNA | 0.37 | 1 | 62778852 | 62779087 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| c1galt1b | LOC106565526 | coding | upstream | 4411 | 62763482 ~ 62774441 (+) |
| LOC110493236 | LOC106583228 | coding | upstream | 18687 | 62747771 ~ 62760165 (+) |
| LOC110494319 | LOC106565529 | coding | upstream | 129327 | 62575985 ~ 62649525 (+) |
| LOC100136666 | LOC100136666 | coding | upstream | 250213 | 62506856 ~ 62528639 (+) |
| LOC110494318 | rheb | coding | upstream | 282321 | 62491971 ~ 62496531 (+) |
| LOC110494322 | LOC106565525 | coding | downstream | 28570 | 62807657 ~ 62812224 (+) |
| stat2 | stat2 | coding | downstream | 47481 | 62826568 ~ 62839920 (+) |
| tsfm | LOC106565519 | coding | downstream | 177637 | 62956724 ~ 62958969 (+) |
| myl6 | LOC106565518 | coding | downstream | 181002 | 62960089 ~ 62968544 (+) |
| pfkmb | LOC106565515 | coding | downstream | 325508 | 63104595 ~ 63121550 (+) |
| G1473924 | NA | non-coding | upstream | 572 | 62777896 ~ 62778280 (+) |
| G1473923 | NA | non-coding | upstream | 1606 | 62774739 ~ 62777246 (+) |
| G1473927 | NA | non-coding | upstream | 7939 | 62770547 ~ 62770913 (+) |
| G1473921 | NA | non-coding | upstream | 15774 | 62762809 ~ 62763078 (+) |
| G1473920 | NA | non-coding | upstream | 16629 | 62761783 ~ 62762223 (+) |
| G1473929 | NA | non-coding | downstream | 41 | 62779128 ~ 62779440 (+) |
| G1473931 | NA | non-coding | downstream | 1192 | 62780279 ~ 62780618 (+) |
| G1473933 | NA | non-coding | downstream | 2468 | 62781555 ~ 62781860 (+) |
| G1473934 | NA | non-coding | downstream | 3755 | 62782842 ~ 62783047 (+) |
| G1473935 | NA | non-coding | downstream | 4511 | 62783598 ~ 62783926 (+) |
| G1473177 | NA | other | upstream | 67716 | 62710339 ~ 62711136 (+) |
| G1473171 | LOC106581772 | other | upstream | 80037 | 62698503 ~ 62698815 (+) |
| LOC110494283 | LOC106565563 | other | upstream | 1221814 | 61555873 ~ 61558328 (+) |
| G1471723 | LOC100380707 | other | upstream | 1779789 | 60972478 ~ 60999063 (+) |
| G1470607 | NA | other | upstream | 2674845 | 60101892 ~ 60104007 (+) |
| G1474159 | NA | other | downstream | 437861 | 63216948 ~ 63217594 (+) |
| srsf3b | LOC106565658 | other | downstream | 879357 | 63658373 ~ 63663255 (+) |
| tmcc2 | LOC106565656 | other | downstream | 905003 | 63684043 ~ 63691033 (+) |
| G1475820 | NA | other | downstream | 1784287 | 64563374 ~ 64565146 (+) |
| LOC110494386 | LOC106565630 | other | downstream | 1829167 | 64608194 ~ 64625111 (+) |
