G1473931


Basic Information

Item Value
gene id G1473931
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 62780279 ~ 62780618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1685654
gcattagtgaggtcgggcagtgATGCTGGGCAATTTGGCCTGActcgcagttggtgttccaattcatcccaacggtgttttgatggggttgagaacagggctctgtgcagaccagtcaagttcttccacaccgatcttgacaaaccatttctgtatggacctcgctttgtgcatgggggcattgtcatgctgaaacaggaaagggccttccacaaactgttgccacaaatttggaagcacagaatcgtctagaatgccattgtatgctgtagcgtaaaGATTTccctaaggggcctagcccgaaccatgaaaaccagccccagaccattattcctcctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1685654 True 340 lncRNA 0.50 1 62780279 62780618

Neighbor

gene id symbol gene type direction distance location
c1galt1b LOC106565526 coding upstream 5838 62763482 ~ 62774441 (+)
LOC110493236 LOC106583228 coding upstream 20114 62747771 ~ 62760165 (+)
LOC110494319 LOC106565529 coding upstream 130754 62575985 ~ 62649525 (+)
LOC100136666 LOC100136666 coding upstream 251640 62506856 ~ 62528639 (+)
LOC110494318 rheb coding upstream 283748 62491971 ~ 62496531 (+)
LOC110494322 LOC106565525 coding downstream 27039 62807657 ~ 62812224 (+)
stat2 stat2 coding downstream 45950 62826568 ~ 62839920 (+)
tsfm LOC106565519 coding downstream 176106 62956724 ~ 62958969 (+)
myl6 LOC106565518 coding downstream 179471 62960089 ~ 62968544 (+)
pfkmb LOC106565515 coding downstream 323977 63104595 ~ 63121550 (+)
G1473929 NA non-coding upstream 839 62779128 ~ 62779440 (+)
G1473928 NA non-coding upstream 1192 62778852 ~ 62779087 (+)
G1473924 NA non-coding upstream 1999 62777896 ~ 62778280 (+)
G1473923 NA non-coding upstream 3033 62774739 ~ 62777246 (+)
G1473927 NA non-coding upstream 9366 62770547 ~ 62770913 (+)
G1473933 NA non-coding downstream 937 62781555 ~ 62781860 (+)
G1473934 NA non-coding downstream 2224 62782842 ~ 62783047 (+)
G1473935 NA non-coding downstream 2980 62783598 ~ 62783926 (+)
G1473937 NA non-coding downstream 10574 62791192 ~ 62791408 (+)
G1473945 NA non-coding downstream 24176 62804794 ~ 62805016 (+)
G1473177 NA other upstream 69143 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 81464 62698503 ~ 62698815 (+)
LOC110494283 LOC106565563 other upstream 1223241 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 1781216 60972478 ~ 60999063 (+)
G1470607 NA other upstream 2676272 60101892 ~ 60104007 (+)
G1474159 NA other downstream 436330 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 877826 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 903472 63684043 ~ 63691033 (+)
G1475820 NA other downstream 1782756 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 1827636 64608194 ~ 64625111 (+)

Expression


Co-expression Network