G1473960



Basic Information


Item Value
gene id G1473960
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 62867827 ~ 62868255 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1685683
cagaaaaagtaaaaaagtaagtatttagaccctttgctatgagactagaaattgagctcaggtgcatcctgtttccattgatcatccttgagatgtttctacaacttgattggagtccacctgtggtaaattcaattgattggacatgatttggaaaggcactcaccAGTCTgttataaggttccacagttgacagtgcatgtcagatcaaaaaccaagccaagaggtcgaaggaattgtccttagagctccgagacaggattgtttcgaggcacagatctggggaagggtaccaaaacatttctgctgcattgaaggtccccaagaacacagtggccgccatcattcGTAAAGGTCAGGGAGGTTAccatgaacccgatggtcactctcacagcactccagagttcttctgtagagatgggagaacct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1685683 True 429 lncRNA 0.45 1 62867827 62868255
Loading

Neighbor


gene id symbol gene type direction distance location
stat2 stat2 coding upstream 27907 62826568 ~ 62839920 (+)
LOC110494322 LOC106565525 coding upstream 55603 62807657 ~ 62812224 (+)
c1galt1b LOC106565526 coding upstream 93386 62763482 ~ 62774441 (+)
LOC110493236 LOC106583228 coding upstream 107662 62747771 ~ 62760165 (+)
LOC110494319 LOC106565529 coding upstream 218302 62575985 ~ 62649525 (+)
tsfm LOC106565519 coding downstream 88469 62956724 ~ 62958969 (+)
myl6 LOC106565518 coding downstream 91834 62960089 ~ 62968544 (+)
pfkmb LOC106565515 coding downstream 236340 63104595 ~ 63121550 (+)
itgb7 LOC106583060 coding downstream 256633 63124888 ~ 63141041 (+)
espl1 espl1 coding downstream 290808 63159063 ~ 63188421 (+)
G1473957 NA non-coding upstream 7372 62860162 ~ 62860455 (+)
G1473911 NA non-coding upstream 40610 62826785 ~ 62827217 (+)
G1473953 NA non-coding upstream 45057 62822556 ~ 62822770 (+)
G1473950 NA non-coding upstream 46597 62821015 ~ 62821230 (+)
G1473948 NA non-coding upstream 52539 62815001 ~ 62815288 (+)
G1473967 NA non-coding downstream 13768 62882023 ~ 62882250 (+)
G1473981 NA non-coding downstream 28901 62897156 ~ 62897547 (+)
G1473985 NA non-coding downstream 36637 62904892 ~ 62905356 (+)
G1473992 NA non-coding downstream 51426 62919681 ~ 62919914 (+)
G1474003 NA non-coding downstream 69029 62937284 ~ 62939881 (+)
G1473177 NA other upstream 156691 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 169012 62698503 ~ 62698815 (+)
LOC110494283 LOC106565563 other upstream 1310789 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 1868764 60972478 ~ 60999063 (+)
G1470607 NA other upstream 2763820 60101892 ~ 60104007 (+)
G1474159 NA other downstream 348693 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 790189 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 815835 63684043 ~ 63691033 (+)
G1475820 NA other downstream 1695119 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 1739999 64608194 ~ 64625111 (+)

Expression


G1473960 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
End of interactive chart.

G1473960 Expression in each Bioproject

Bar chart with 21 bars.
G1473960 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network