G1474113


Basic Information

Item Value
gene id G1474113
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 63133763 ~ 63134241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1685858
GTCTGAAATCTGAAATTCAAACAGGGACAGGTCTGAAATCTGAAATACAAATAGGGACAGGTCTGAAATCTGAAATACAAACAGGGACAGGTCTGAAATCTGAAATACAAACAGGGACAGGTCTGAAATCTGAAATACAAACAGGGACAGGTCTGAAATCTGAAATTCAAACAGGGACAGGTCTGAAATCTGAAATTTGTAGTGGTGCTTTATAGATTATTTTTGAAACCGTGCAAATT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106607296 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1685858 True 239 lncRNA 0.37 2 63133763 63134241

Neighbor

gene id symbol gene type direction distance location
pfkmb LOC106565515 coding upstream 12213 63104595 ~ 63121550 (+)
myl6 LOC106565518 coding upstream 165219 62960089 ~ 62968544 (+)
tsfm LOC106565519 coding upstream 174794 62956724 ~ 62958969 (+)
stat2 stat2 coding upstream 293843 62826568 ~ 62839920 (+)
LOC110494322 LOC106565525 coding upstream 321539 62807657 ~ 62812224 (+)
espl1 espl1 coding downstream 24822 63159063 ~ 63188421 (+)
pfdn5 pfdn5 coding downstream 54254 63188495 ~ 63194667 (+)
LOC110494337 LOC106565677 coding downstream 61838 63196079 ~ 63201204 (+)
LOC110494339 NA coding downstream 84948 63219189 ~ 63226560 (+)
LOC110494340 LOC106565674 coding downstream 98156 63232397 ~ 63238751 (+)
G1474055 NA non-coding upstream 98031 63035341 ~ 63035732 (+)
G1474026 NA non-coding upstream 151374 62981211 ~ 62982389 (+)
G1474024 smarcc2 non-coding upstream 153965 62979400 ~ 62979798 (+)
G1474022 NA non-coding upstream 159369 62971531 ~ 62974394 (+)
G1474003 NA non-coding upstream 193882 62937284 ~ 62939881 (+)
G1474175 NA non-coding downstream 110770 63245011 ~ 63245267 (+)
G1474176 NA non-coding downstream 111132 63245373 ~ 63245598 (+)
G1474181 NA non-coding downstream 114590 63248831 ~ 63249046 (+)
G1473177 NA other upstream 422627 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 434948 62698503 ~ 62698815 (+)
LOC110494283 LOC106565563 other upstream 1576725 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 2134700 60972478 ~ 60999063 (+)
G1470607 NA other upstream 3029756 60101892 ~ 60104007 (+)
G1474159 NA other downstream 82707 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 524203 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 549849 63684043 ~ 63691033 (+)
G1475820 NA other downstream 1429133 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 1474013 64608194 ~ 64625111 (+)

Expression


Co-expression Network