G1474175


Basic Information

Item Value
gene id G1474175
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 63245011 ~ 63245267 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1685921
catcgatggccctgaacaaactttatttgactctatgcaaactggaaaccacatatcctgaggctgcattcattgtagctgggaattttaacaaggctaatctgaaaacaagactccctaaatctatcagcatatcgattgtgctaccagggctggtaaaaccctggatcattgttattctaacttccgcaacgcatataaggccctcccccgccctcctttcggaaaatctgaccatgactccatttagttgctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1685921 True 257 lncRNA 0.44 1 63245011 63245267

Neighbor

gene id symbol gene type direction distance location
LOC110494340 LOC106565674 coding upstream 6260 63232397 ~ 63238751 (+)
LOC110494339 NA coding upstream 18451 63219189 ~ 63226560 (+)
LOC110494337 LOC106565677 coding upstream 43807 63196079 ~ 63201204 (+)
pfdn5 pfdn5 coding upstream 50344 63188495 ~ 63194667 (+)
espl1 espl1 coding upstream 56590 63159063 ~ 63188421 (+)
LOC110494341 LOC106565672 coding downstream 4297 63249564 ~ 63265513 (+)
LOC110494344 LOC106583073 coding downstream 111405 63356672 ~ 63372554 (+)
LOC110494347 LOC106565667 coding downstream 220834 63466101 ~ 63471249 (+)
LOC110494349 LOC106565665 coding downstream 271469 63516736 ~ 63543481 (+)
LOC118940486 NA coding downstream 329293 63574560 ~ 63580589 (+)
G1474113 NA non-coding upstream 110770 63133763 ~ 63134241 (+)
G1474055 NA non-coding upstream 209279 63035341 ~ 63035732 (+)
G1474026 NA non-coding upstream 262622 62981211 ~ 62982389 (+)
G1474176 NA non-coding downstream 106 63245373 ~ 63245598 (+)
G1474181 NA non-coding downstream 3564 63248831 ~ 63249046 (+)
G1474199 NA non-coding downstream 109090 63354357 ~ 63354689 (+)
G1474200 NA non-coding downstream 109451 63354718 ~ 63354917 (+)
G1474202 NA non-coding downstream 127722 63372989 ~ 63450910 (+)
G1474159 NA other upstream 27417 63216948 ~ 63217594 (+)
G1473177 NA other upstream 533875 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 546196 62698503 ~ 62698815 (+)
LOC110494283 LOC106565563 other upstream 1687973 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 2245948 60972478 ~ 60999063 (+)
srsf3b LOC106565658 other downstream 413177 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 438823 63684043 ~ 63691033 (+)
G1475820 NA other downstream 1318107 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 1362987 64608194 ~ 64625111 (+)
LOC110494389 NA other downstream 1510054 64755321 ~ 64780475 (+)

Expression


Co-expression Network