G1474199


Basic Information

Item Value
gene id G1474199
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 63354357 ~ 63354689 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1685945
cgcacaattaacccagcgtcgtccgggttaggggagggtttggccggcatagatgttcttgtcccatcgcgcactagcgactcctgtggcgggccgggtgcagtgcacgctgacacggttgccaggtgtacggtgtttcctccgacacattggtgtggctggcttcctggttaagtgggcattgtgtcaagaatcAGTGCTTCTGGGTTGGGTTGATTTCGGAGGACGCAAGGCACTCAACCTTCTCCTCTCACGAGTCTGTACGGGaattgcagcaatgagacaagactgtaactaccaattggataccacgaaattggggagacaacgggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1685945 True 333 lncRNA 0.56 1 63354357 63354689

Neighbor

gene id symbol gene type direction distance location
LOC110494341 LOC106565672 coding upstream 88844 63249564 ~ 63265513 (+)
LOC110494340 LOC106565674 coding upstream 115606 63232397 ~ 63238751 (+)
LOC110494339 NA coding upstream 127797 63219189 ~ 63226560 (+)
LOC110494337 LOC106565677 coding upstream 153153 63196079 ~ 63201204 (+)
pfdn5 pfdn5 coding upstream 159690 63188495 ~ 63194667 (+)
LOC110494344 LOC106583073 coding downstream 1983 63356672 ~ 63372554 (+)
LOC110494347 LOC106565667 coding downstream 111412 63466101 ~ 63471249 (+)
LOC110494349 LOC106565665 coding downstream 162047 63516736 ~ 63543481 (+)
LOC118940486 NA coding downstream 219871 63574560 ~ 63580589 (+)
srsf3b LOC106565658 coding downstream 303684 63658373 ~ 63663255 (+)
G1474181 NA non-coding upstream 105311 63248831 ~ 63249046 (+)
G1474176 NA non-coding upstream 108759 63245373 ~ 63245598 (+)
G1474175 NA non-coding upstream 109090 63245011 ~ 63245267 (+)
G1474200 NA non-coding downstream 29 63354718 ~ 63354917 (+)
G1474202 NA non-coding downstream 18300 63372989 ~ 63450910 (+)
G1474170 NA non-coding downstream 45174 63399863 ~ 63409817 (+)
G1474601 NA non-coding downstream 100424 63455113 ~ 63455349 (+)
G1474604 NA non-coding downstream 102199 63456888 ~ 63457111 (+)
G1474159 NA other upstream 136763 63216948 ~ 63217594 (+)
G1473177 NA other upstream 643221 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 655542 62698503 ~ 62698815 (+)
LOC110494283 LOC106565563 other upstream 1797319 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 2355294 60972478 ~ 60999063 (+)
tmcc2 LOC106565656 other downstream 329401 63684043 ~ 63691033 (+)
G1475820 NA other downstream 1208685 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 1253565 64608194 ~ 64625111 (+)
LOC110494389 NA other downstream 1400632 64755321 ~ 64780475 (+)

Expression


Co-expression Network