G1474170


Basic Information

Item Value
gene id G1474170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 63399863 ~ 63409817 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1685915
atgtccggtgaacaggtcaggattccatagccgcagacaaAACAGTtgtaactggagcagcagcacggccaggtggactggggacagcaaggagtcatcatgccaggtagtactgaggcatggtcctagggctcaggtcctCTGGATCAGCAGGTTTTGTGATGATGTAGCCTgctgtctgttctgctctgctctttaAGGATATTAagctggttggttagctcccagtgCTGGGATGCAGGATAGACATCAGTCAGCCGCATGCGTTGTGTATGGTGCTGACTGCTGCTATGGCACTCCCCTTCTTTATCAGACTGctattcttctcctcctctgccttTGCCTTGTCTTTCGGTTATTTTCCGGATGAGGGTAGCTGTGTTGACAGTGATAGATTtaaggggatgagagagagaaaaaaagaaaaggagCAAATGTTGTCTCCCTCTACTTGCTAATGTAAaccgcacactcacacacataaactcactctctccctctctcttgcacactcacacaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1685915 True 521 lncRNA 0.49 2 63399863 63409817

Neighbor

gene id symbol gene type direction distance location
LOC110494344 LOC106583073 coding upstream 27309 63356672 ~ 63372554 (+)
LOC110494341 LOC106565672 coding upstream 134350 63249564 ~ 63265513 (+)
LOC110494340 LOC106565674 coding upstream 161112 63232397 ~ 63238751 (+)
LOC110494339 NA coding upstream 173303 63219189 ~ 63226560 (+)
LOC110494337 LOC106565677 coding upstream 198659 63196079 ~ 63201204 (+)
LOC110494347 LOC106565667 coding downstream 56284 63466101 ~ 63471249 (+)
LOC110494349 LOC106565665 coding downstream 106919 63516736 ~ 63543481 (+)
LOC118940486 NA coding downstream 164743 63574560 ~ 63580589 (+)
srsf3b LOC106565658 coding downstream 248556 63658373 ~ 63663255 (+)
cdkn1a LOC106565657 coding downstream 256031 63665848 ~ 63671434 (+)
G1474200 NA non-coding upstream 44946 63354718 ~ 63354917 (+)
G1474199 NA non-coding upstream 45174 63354357 ~ 63354689 (+)
G1474181 NA non-coding upstream 150817 63248831 ~ 63249046 (+)
G1474176 NA non-coding upstream 154265 63245373 ~ 63245598 (+)
G1474175 NA non-coding upstream 154596 63245011 ~ 63245267 (+)
G1474601 NA non-coding downstream 45296 63455113 ~ 63455349 (+)
G1474604 NA non-coding downstream 47071 63456888 ~ 63457111 (+)
G1474613 NA non-coding downstream 52645 63462462 ~ 63462670 (+)
G1474626 NA non-coding downstream 68782 63478599 ~ 63478903 (+)
G1474628 NA non-coding downstream 69502 63479319 ~ 63479519 (+)
G1474159 NA other upstream 182269 63216948 ~ 63217594 (+)
G1473177 NA other upstream 688727 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 701048 62698503 ~ 62698815 (+)
LOC110494283 LOC106565563 other upstream 1842825 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 2400800 60972478 ~ 60999063 (+)
tmcc2 LOC106565656 other downstream 274273 63684043 ~ 63691033 (+)
G1475820 NA other downstream 1153557 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 1198437 64608194 ~ 64625111 (+)
LOC110494389 NA other downstream 1345504 64755321 ~ 64780475 (+)

Expression


Co-expression Network