G1474626


Basic Information

Item Value
gene id G1474626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 63478599 ~ 63478903 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1686449
GCCAGTAGGTTGAGAGATGGGGATCCATTGGATGCTTCCTGTGAAGTAGGAGGGGTCGGTTCCTCCCAGGATTAACAAACTGCCATCTACAACCCAGTCCTCCAGGGAAATCTCACTTGGTCAGTTAGATGGAGAACACGTCTTGGGGGATCTTGCCATGTTTCCAAATGTTGTCAAATACAGGAGTGCCTCCCTTAATTGACAGCTGCTTGGGGAAGACCAGACTCATAATCCCATCCCATGGTAATGTCTGCATGAGTGTCCTCCACCAGACTCCGGCCAAAGATATGgtgtcacagatctgg

Function

NR:

description
pepsin A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1686449 True 305 lncRNA 0.50 1 63478599 63478903

Neighbor

gene id symbol gene type direction distance location
LOC110494347 LOC106565667 coding upstream 7350 63466101 ~ 63471249 (+)
LOC110494344 LOC106583073 coding upstream 106045 63356672 ~ 63372554 (+)
LOC110494341 LOC106565672 coding upstream 213086 63249564 ~ 63265513 (+)
LOC110494340 LOC106565674 coding upstream 239848 63232397 ~ 63238751 (+)
LOC110494339 NA coding upstream 252039 63219189 ~ 63226560 (+)
LOC110494349 LOC106565665 coding downstream 37833 63516736 ~ 63543481 (+)
LOC118940486 NA coding downstream 95657 63574560 ~ 63580589 (+)
srsf3b LOC106565658 coding downstream 179470 63658373 ~ 63663255 (+)
cdkn1a LOC106565657 coding downstream 186945 63665848 ~ 63671434 (+)
tmcc2 LOC106565656 coding downstream 205140 63684043 ~ 63691033 (+)
G1474613 NA non-coding upstream 15929 63462462 ~ 63462670 (+)
G1474604 NA non-coding upstream 21488 63456888 ~ 63457111 (+)
G1474601 NA non-coding upstream 23250 63455113 ~ 63455349 (+)
G1474202 NA non-coding upstream 27689 63372989 ~ 63450910 (+)
G1474170 NA non-coding upstream 68782 63399863 ~ 63409817 (+)
G1474628 NA non-coding downstream 416 63479319 ~ 63479519 (+)
G1474632 LOC106565663 non-coding downstream 5472 63484375 ~ 63489600 (+)
G1474645 NA non-coding downstream 27506 63506409 ~ 63506836 (+)
G1474648 NA non-coding downstream 35244 63514147 ~ 63514416 (+)
G1474650 NA non-coding downstream 64603 63543506 ~ 63545595 (+)
G1474159 NA other upstream 261005 63216948 ~ 63217594 (+)
G1473177 NA other upstream 767463 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 779784 62698503 ~ 62698815 (+)
LOC110494283 LOC106565563 other upstream 1921561 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 2479536 60972478 ~ 60999063 (+)
G1475820 NA other downstream 1084471 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 1129351 64608194 ~ 64625111 (+)
LOC110494389 NA other downstream 1276418 64755321 ~ 64780475 (+)

Expression


Co-expression Network