G1474725


Basic Information

Item Value
gene id G1474725
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 63645011 ~ 63645409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1686558
ttccaccgtctccatccgtatcgccctgcgcctcgccctccgggtcgtccccgaggtcgGTGCCGACGCGCGGcaagggggggtggggtggggtactgtcacgacttccgccgaagtcggtccctctccttgttcgggcggtgttcggcagtcgacgtcaccaaccttctagccatcattgatccatttttcattttccattggttttgtcttgtcttccttcacacctggttccaatcccatcaattacatgttgtgtatttaaccccctgtttcccctcatgttttgttggagattgttttattgtatgtTTGTGCAAGTCATGTGtcggtgtgcgacgggttttgtacccgcTTATGTTGTTTTTGTATATTTTGTTTTTTGGAGTTGTATGAGCA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1686558 True 399 lncRNA 0.51 1 63645011 63645409

Neighbor

gene id symbol gene type direction distance location
LOC118940486 NA coding upstream 64422 63574560 ~ 63580589 (+)
LOC110494349 LOC106565665 coding upstream 101530 63516736 ~ 63543481 (+)
LOC110494347 LOC106565667 coding upstream 173762 63466101 ~ 63471249 (+)
LOC110494344 LOC106583073 coding upstream 272457 63356672 ~ 63372554 (+)
LOC110494341 LOC106565672 coding upstream 379498 63249564 ~ 63265513 (+)
srsf3b LOC106565658 coding downstream 12964 63658373 ~ 63663255 (+)
cdkn1a LOC106565657 coding downstream 20439 63665848 ~ 63671434 (+)
tmcc2 LOC106565656 coding downstream 38634 63684043 ~ 63691033 (+)
bysl bysl coding downstream 56669 63702078 ~ 63705600 (+)
dstyk LOC106565654 coding downstream 94953 63740362 ~ 63779877 (+)
G1474650 NA non-coding upstream 99416 63543506 ~ 63545595 (+)
G1474648 NA non-coding upstream 130595 63514147 ~ 63514416 (+)
G1474645 NA non-coding upstream 138175 63506409 ~ 63506836 (+)
G1474632 LOC106565663 non-coding upstream 155411 63484375 ~ 63489600 (+)
G1474628 NA non-coding upstream 165492 63479319 ~ 63479519 (+)
G1474803 NA non-coding downstream 5625 63651034 ~ 63651292 (+)
G1474814 NA non-coding downstream 22066 63667475 ~ 63667700 (+)
G1474813 NA non-coding downstream 27491 63672900 ~ 63673428 (+)
G1474819 NA non-coding downstream 32353 63677762 ~ 63678148 (+)
G1474159 NA other upstream 427417 63216948 ~ 63217594 (+)
G1473177 NA other upstream 933875 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 946196 62698503 ~ 62698815 (+)
LOC110494283 LOC106565563 other upstream 2087973 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 2645948 60972478 ~ 60999063 (+)
G1475820 NA other downstream 917965 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 962845 64608194 ~ 64625111 (+)
LOC110494389 NA other downstream 1109912 64755321 ~ 64780475 (+)

Expression


Co-expression Network