G1474814


Basic Information

Item Value
gene id G1474814
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 63667475 ~ 63667700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1686661
CAGGTTCTGAAGTCATGTGCGTCTGCTGTATTTCTCCCGCCACTTACTCGAATCCGCCCCTTTCAGTGATGTCAATGGAGAGCTCTTTGAGTGGAAAGAGGAAATAAGGGTTTctccaatatatatattttttgtagacTATTCGTTTACTGTAGCTAGTTAACTCGGGTTGTATTGTTTTGAATGACATCAGCCATGGTATCATGAAGATACTGTAAGATTAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1686661 True 226 lncRNA 0.40 1 63667475 63667700

Neighbor

gene id symbol gene type direction distance location
srsf3b LOC106565658 coding upstream 4220 63658373 ~ 63663255 (+)
LOC118940486 NA coding upstream 86886 63574560 ~ 63580589 (+)
LOC110494349 LOC106565665 coding upstream 123994 63516736 ~ 63543481 (+)
LOC110494347 LOC106565667 coding upstream 196226 63466101 ~ 63471249 (+)
LOC110494344 LOC106583073 coding upstream 294921 63356672 ~ 63372554 (+)
tmcc2 LOC106565656 coding downstream 16343 63684043 ~ 63691033 (+)
bysl bysl coding downstream 34378 63702078 ~ 63705600 (+)
dstyk LOC106565654 coding downstream 72662 63740362 ~ 63779877 (+)
LOC110494364 LOC106565650 coding downstream 210539 63878239 ~ 63883527 (+)
nbl1 nbl1 coding downstream 225298 63892998 ~ 63903875 (+)
G1474803 NA non-coding upstream 16183 63651034 ~ 63651292 (+)
G1474725 NA non-coding upstream 22066 63645011 ~ 63645409 (+)
G1474650 NA non-coding upstream 121880 63543506 ~ 63545595 (+)
G1474648 NA non-coding upstream 153059 63514147 ~ 63514416 (+)
G1474645 NA non-coding upstream 160639 63506409 ~ 63506836 (+)
cdkn1a LOC106565657 non-coding downstream 735 63665848 ~ 63671434 (+)
G1474813 NA non-coding downstream 5200 63672900 ~ 63673428 (+)
G1474819 NA non-coding downstream 10062 63677762 ~ 63678148 (+)
G1474827 NA non-coding downstream 24104 63691804 ~ 63694554 (+)
G1474833 NA non-coding downstream 41192 63708892 ~ 63709124 (+)
G1474159 NA other upstream 449881 63216948 ~ 63217594 (+)
G1473177 NA other upstream 956339 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 968660 62698503 ~ 62698815 (+)
LOC110494283 LOC106565563 other upstream 2110437 61555873 ~ 61558328 (+)
G1475820 NA other downstream 895674 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 940554 64608194 ~ 64625111 (+)
LOC110494389 NA other downstream 1087621 64755321 ~ 64780475 (+)
G1476510 NA other downstream 1635717 65303417 ~ 65304128 (+)

Expression


Co-expression Network