G1475008


Basic Information

Item Value
gene id G1475008
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 63977668 ~ 63977920 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1686870
gcctcccccatttctccttcaccgaaatccagatagctgatgttctgaaagagctgcaaaatctggacccctacaaatcagccaggctagacaatctggaccctctctttctaaaatgatctgccaaaattgttgcaacccctattactagcctgttcaacctctctttcgtatcgtctgagatccccaaagattggaaagctgctgcggtcattcccctcttcaaagggggagacactctagacccaaactg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1686870 True 253 lncRNA 0.48 1 63977668 63977920

Neighbor

gene id symbol gene type direction distance location
LOC110494366 LOC106565648 coding upstream 58112 63909040 ~ 63919556 (+)
nbl1 nbl1 coding upstream 73793 63892998 ~ 63903875 (+)
LOC110494364 LOC106565650 coding upstream 94141 63878239 ~ 63883527 (+)
dstyk LOC106565654 coding upstream 197791 63740362 ~ 63779877 (+)
bysl bysl coding upstream 272068 63702078 ~ 63705600 (+)
LOC110494367 LOC106565647 coding downstream 65235 64043155 ~ 64052786 (+)
LOC110494368 LOC106565646 coding downstream 75308 64053228 ~ 64056392 (+)
LOC110493238 NA coding downstream 79077 64056997 ~ 64058645 (+)
fndc10 LOC106565645 coding downstream 85850 64063770 ~ 64066586 (+)
ssu72 ssu72l coding downstream 88851 64066771 ~ 64071414 (+)
G1475005 NA non-coding upstream 2122 63975346 ~ 63975546 (+)
G1474995 NA non-coding upstream 11095 63966360 ~ 63966573 (+)
G1474977 NA non-coding upstream 26583 63944119 ~ 63951085 (+)
G1475012 NA non-coding downstream 2699 63980619 ~ 63980854 (+)
G1475066 atad3 non-coding downstream 111837 64089757 ~ 64091921 (+)
G1475072 NA non-coding downstream 117785 64095705 ~ 64096426 (+)
G1475078 NA non-coding downstream 129312 64107232 ~ 64107471 (+)
G1475111 NA non-coding downstream 201336 64179256 ~ 64180301 (+)
tmcc2 LOC106565656 other upstream 289578 63684043 ~ 63691033 (+)
srsf3b LOC106565658 other upstream 314414 63658373 ~ 63663255 (+)
G1474159 NA other upstream 760074 63216948 ~ 63217594 (+)
G1473177 NA other upstream 1266532 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 1278853 62698503 ~ 62698815 (+)
G1475820 NA other downstream 585454 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 630334 64608194 ~ 64625111 (+)
LOC110494389 NA other downstream 777401 64755321 ~ 64780475 (+)
G1476510 NA other downstream 1325497 65303417 ~ 65304128 (+)
G1476520 NA other downstream 1347957 65325877 ~ 65327163 (+)

Expression


Co-expression Network