G1475072


Basic Information

Item Value
gene id G1475072
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 64095705 ~ 64096426 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1686939
CTTCTGTGCTCTGATTACATGTGGTTGCCCTCCTTATAGAGCCGCTGCATCATCGTAAATCAGACCTTGGGAACAAAAATGCCATACAGCGGTGTACTGAATTCTCACTAGCTGGAACAGAGTGGTAACTAGGTTAAgacatatactgtaggcctaatgTACTGACCTTCACCAGGTTGTGCATAAGGGCGGGATACTTCATGCCGTGCTCCCGTGATGCTGCCGCGATGCGTGAGATCCACAACGTACGCATGTTACGTCGTTTTATTTTGCGAGCCTTAGTAGCATATACAAAGGCCCTTCGTACTGCCCTCACTGCCAGGCTGTAGCATCTGTTCTTTCTACCTCTGAAGTGCTGATGGACACACAGATAGGGGGAAGAGAAATACAGATGATGGGAATGGGCAAAAAGGGTGACACACTACAAGGGTATGAGGGTTCTTTTGGGCCAAGTTCATTTTAACTCTGACAATACAGGAAGTGAATTGAAATGAATGAATTGAAAAGTCCATGTATATAACATTGCACAATTTTAAT

Function

NR:

description
39S ribosomal protein L20, mitochondrial precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1686939 True 537 lncRNA 0.45 2 64095705 64096426

Neighbor

gene id symbol gene type direction distance location
LOC110494371 LOC106565644 coding upstream 16267 64074917 ~ 64079438 (+)
ssu72 ssu72l coding upstream 24291 64066771 ~ 64071414 (+)
fndc10 LOC106565645 coding upstream 29119 64063770 ~ 64066586 (+)
LOC110493238 NA coding upstream 37060 64056997 ~ 64058645 (+)
LOC110494368 LOC106565646 coding upstream 39313 64053228 ~ 64056392 (+)
sdhb sdhb coding downstream 24095 64120521 ~ 64128339 (+)
mfap2 mfap2 coding downstream 32526 64128952 ~ 64133653 (+)
ap5b1 ap5b1 coding downstream 81241 64177667 ~ 64198472 (+)
p3h1 p3h1 coding downstream 113815 64210241 ~ 64218677 (+)
cldn19 cldn19 coding downstream 160478 64256904 ~ 64280613 (+)
G1475066 atad3 non-coding upstream 3784 64089757 ~ 64091921 (+)
G1475012 NA non-coding upstream 114851 63980619 ~ 63980854 (+)
G1475008 NA non-coding upstream 117785 63977668 ~ 63977920 (+)
G1475005 NA non-coding upstream 120159 63975346 ~ 63975546 (+)
G1474995 NA non-coding upstream 129132 63966360 ~ 63966573 (+)
G1475078 NA non-coding downstream 10806 64107232 ~ 64107471 (+)
G1475111 NA non-coding downstream 82830 64179256 ~ 64180301 (+)
G1475223 NA non-coding downstream 277119 64373545 ~ 64379198 (+)
G1475261 LOC100194703 non-coding downstream 345795 64442221 ~ 64442495 (+)
G1475265 NA non-coding downstream 353605 64450031 ~ 64450493 (+)
tmcc2 LOC106565656 other upstream 407615 63684043 ~ 63691033 (+)
srsf3b LOC106565658 other upstream 432451 63658373 ~ 63663255 (+)
G1474159 NA other upstream 878111 63216948 ~ 63217594 (+)
G1473177 NA other upstream 1384569 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 1396890 62698503 ~ 62698815 (+)
G1475820 NA other downstream 466948 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 511828 64608194 ~ 64625111 (+)
LOC110494389 NA other downstream 658895 64755321 ~ 64780475 (+)
G1476510 NA other downstream 1206991 65303417 ~ 65304128 (+)
G1476520 NA other downstream 1229451 65325877 ~ 65327163 (+)

Expression


Co-expression Network