Gene
RNA
| Item | Value |
|---|---|
| gene id | G1475223 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 64373545 ~ 64379198 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1687099 | True | 233 | lncRNA | 0.39 | 2 | 64373545 | 64379198 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cldn19 | cldn19 | coding | upstream | 92932 | 64256904 ~ 64280613 (+) |
| p3h1 | p3h1 | coding | upstream | 154868 | 64210241 ~ 64218677 (+) |
| ap5b1 | ap5b1 | coding | upstream | 175073 | 64177667 ~ 64198472 (+) |
| mfap2 | mfap2 | coding | upstream | 239892 | 64128952 ~ 64133653 (+) |
| sdhb | sdhb | coding | upstream | 245206 | 64120521 ~ 64128339 (+) |
| nucks1a | LOC106565634 | coding | downstream | 147875 | 64527073 ~ 64553355 (+) |
| LOC110494383 | LOC106565632 | coding | downstream | 192805 | 64572003 ~ 64581346 (+) |
| si:ch211-117k10.3 | LOC106565633 | coding | downstream | 202468 | 64581666 ~ 64590850 (+) |
| LOC110494386 | LOC106565630 | coding | downstream | 228996 | 64608194 ~ 64625111 (+) |
| LOC110494389 | NA | coding | downstream | 376196 | 64755321 ~ 64780475 (+) |
| G1475111 | NA | non-coding | upstream | 193244 | 64179256 ~ 64180301 (+) |
| G1475078 | NA | non-coding | upstream | 266074 | 64107232 ~ 64107471 (+) |
| G1475072 | NA | non-coding | upstream | 277119 | 64095705 ~ 64096426 (+) |
| G1475066 | atad3 | non-coding | upstream | 281624 | 64089757 ~ 64091921 (+) |
| G1475012 | NA | non-coding | upstream | 392691 | 63980619 ~ 63980854 (+) |
| G1475261 | LOC100194703 | non-coding | downstream | 63023 | 64442221 ~ 64442495 (+) |
| G1475265 | NA | non-coding | downstream | 70833 | 64450031 ~ 64450493 (+) |
| G1475268 | NA | non-coding | downstream | 78593 | 64457791 ~ 64458036 (+) |
| G1475787 | NA | non-coding | downstream | 115763 | 64494961 ~ 64495198 (+) |
| G1475799 | NA | non-coding | downstream | 131729 | 64510927 ~ 64511267 (+) |
| tmcc2 | LOC106565656 | other | upstream | 685455 | 63684043 ~ 63691033 (+) |
| srsf3b | LOC106565658 | other | upstream | 710291 | 63658373 ~ 63663255 (+) |
| G1474159 | NA | other | upstream | 1155951 | 63216948 ~ 63217594 (+) |
| G1473177 | NA | other | upstream | 1662409 | 62710339 ~ 62711136 (+) |
| G1473171 | LOC106581772 | other | upstream | 1674730 | 62698503 ~ 62698815 (+) |
| G1475820 | NA | other | downstream | 184176 | 64563374 ~ 64565146 (+) |
| G1476510 | NA | other | downstream | 924219 | 65303417 ~ 65304128 (+) |
| G1476520 | NA | other | downstream | 946679 | 65325877 ~ 65327163 (+) |
