G1475261 (LOC100194703)


Basic Information

Item Value
gene id G1475261
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 64442221 ~ 64442495 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1687140
taactaagtggctcggggaacaaaacatcgatattttgggtctatggccaggaaactccccagaccttaatcccattgagaacttgtggtcaatcctcaagaggcgggtggacaaacaaaaacccacaaattctgacaaactccaagcattaattatgcaagaatgggctgccatcagtcaggatgtggcccagaagttaattggcagcatgccagggcagaggtcttgaaaaagaagggtcaacactgcaaatattgactctttgcatcaactt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1687140 True 275 lncRNA 0.45 1 64442221 64442495

Neighbor

gene id symbol gene type direction distance location
cldn19 cldn19 coding upstream 161608 64256904 ~ 64280613 (+)
p3h1 p3h1 coding upstream 223544 64210241 ~ 64218677 (+)
ap5b1 ap5b1 coding upstream 243749 64177667 ~ 64198472 (+)
mfap2 mfap2 coding upstream 308568 64128952 ~ 64133653 (+)
sdhb sdhb coding upstream 313882 64120521 ~ 64128339 (+)
nucks1a LOC106565634 coding downstream 84578 64527073 ~ 64553355 (+)
LOC110494383 LOC106565632 coding downstream 129508 64572003 ~ 64581346 (+)
si:ch211-117k10.3 LOC106565633 coding downstream 139171 64581666 ~ 64590850 (+)
LOC110494386 LOC106565630 coding downstream 165699 64608194 ~ 64625111 (+)
LOC110494389 NA coding downstream 312899 64755321 ~ 64780475 (+)
G1475223 NA non-coding upstream 63023 64373545 ~ 64379198 (+)
G1475111 NA non-coding upstream 261920 64179256 ~ 64180301 (+)
G1475078 NA non-coding upstream 334750 64107232 ~ 64107471 (+)
G1475072 NA non-coding upstream 345795 64095705 ~ 64096426 (+)
G1475066 atad3 non-coding upstream 350300 64089757 ~ 64091921 (+)
G1475265 NA non-coding downstream 7536 64450031 ~ 64450493 (+)
G1475268 NA non-coding downstream 15296 64457791 ~ 64458036 (+)
G1475787 NA non-coding downstream 52466 64494961 ~ 64495198 (+)
G1475799 NA non-coding downstream 68432 64510927 ~ 64511267 (+)
G1475807 NA non-coding downstream 76234 64518729 ~ 64519172 (+)
tmcc2 LOC106565656 other upstream 754131 63684043 ~ 63691033 (+)
srsf3b LOC106565658 other upstream 778967 63658373 ~ 63663255 (+)
G1474159 NA other upstream 1224627 63216948 ~ 63217594 (+)
G1473177 NA other upstream 1731085 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 1743406 62698503 ~ 62698815 (+)
G1475820 NA other downstream 120879 64563374 ~ 64565146 (+)
G1476510 NA other downstream 860922 65303417 ~ 65304128 (+)
G1476520 NA other downstream 883382 65325877 ~ 65327163 (+)

Expression


Co-expression Network