G1475787


Basic Information

Item Value
gene id G1475787
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 64494961 ~ 64495198 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1687731
cagatggtgaggcgtgattcatcattccagagaacgcctttccactgctacagagtccaatggcggaaaactttacaccactctagccgacacttggcattgcgtatggtgatcttaggcttgtgtgcggctgctcggccatggaaacccatttcatgaagctcccgacaaaaaGTTActgtgttgacgttgcttcccagaggcagtttggaagtcCGTAGTGAGTGTGGCAACCCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1687731 True 238 lncRNA 0.51 1 64494961 64495198

Neighbor

gene id symbol gene type direction distance location
cldn19 cldn19 coding upstream 214348 64256904 ~ 64280613 (+)
p3h1 p3h1 coding upstream 276284 64210241 ~ 64218677 (+)
ap5b1 ap5b1 coding upstream 296489 64177667 ~ 64198472 (+)
mfap2 mfap2 coding upstream 361308 64128952 ~ 64133653 (+)
sdhb sdhb coding upstream 366622 64120521 ~ 64128339 (+)
nucks1a LOC106565634 coding downstream 31875 64527073 ~ 64553355 (+)
LOC110494383 LOC106565632 coding downstream 76805 64572003 ~ 64581346 (+)
si:ch211-117k10.3 LOC106565633 coding downstream 86468 64581666 ~ 64590850 (+)
LOC110494386 LOC106565630 coding downstream 112996 64608194 ~ 64625111 (+)
LOC110494389 NA coding downstream 260196 64755321 ~ 64780475 (+)
G1475268 NA non-coding upstream 36925 64457791 ~ 64458036 (+)
G1475265 NA non-coding upstream 44468 64450031 ~ 64450493 (+)
G1475261 LOC100194703 non-coding upstream 52466 64442221 ~ 64442495 (+)
G1475223 NA non-coding upstream 115763 64373545 ~ 64379198 (+)
G1475111 NA non-coding upstream 314660 64179256 ~ 64180301 (+)
G1475799 NA non-coding downstream 15729 64510927 ~ 64511267 (+)
G1475807 NA non-coding downstream 23531 64518729 ~ 64519172 (+)
G1475832 NA non-coding downstream 98028 64593226 ~ 64593455 (+)
tmcc2 LOC106565656 other upstream 806871 63684043 ~ 63691033 (+)
srsf3b LOC106565658 other upstream 831707 63658373 ~ 63663255 (+)
G1474159 NA other upstream 1277367 63216948 ~ 63217594 (+)
G1473177 NA other upstream 1783825 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 1796146 62698503 ~ 62698815 (+)
G1475820 NA other downstream 68176 64563374 ~ 64565146 (+)
G1476510 NA other downstream 808219 65303417 ~ 65304128 (+)
G1476520 NA other downstream 830679 65325877 ~ 65327163 (+)

Expression


Co-expression Network