Gene
RNA
| Item | Value |
|---|---|
| gene id | G1475799 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 64510927 ~ 64511267 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1687743 | True | 341 | lncRNA | 0.34 | 1 | 64510927 | 64511267 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cldn19 | cldn19 | coding | upstream | 230314 | 64256904 ~ 64280613 (+) |
| p3h1 | p3h1 | coding | upstream | 292250 | 64210241 ~ 64218677 (+) |
| ap5b1 | ap5b1 | coding | upstream | 312455 | 64177667 ~ 64198472 (+) |
| mfap2 | mfap2 | coding | upstream | 377274 | 64128952 ~ 64133653 (+) |
| sdhb | sdhb | coding | upstream | 382588 | 64120521 ~ 64128339 (+) |
| nucks1a | LOC106565634 | coding | downstream | 15806 | 64527073 ~ 64553355 (+) |
| LOC110494383 | LOC106565632 | coding | downstream | 60736 | 64572003 ~ 64581346 (+) |
| si:ch211-117k10.3 | LOC106565633 | coding | downstream | 70399 | 64581666 ~ 64590850 (+) |
| LOC110494386 | LOC106565630 | coding | downstream | 96927 | 64608194 ~ 64625111 (+) |
| LOC110494389 | NA | coding | downstream | 244127 | 64755321 ~ 64780475 (+) |
| G1475787 | NA | non-coding | upstream | 15729 | 64494961 ~ 64495198 (+) |
| G1475268 | NA | non-coding | upstream | 52891 | 64457791 ~ 64458036 (+) |
| G1475265 | NA | non-coding | upstream | 60434 | 64450031 ~ 64450493 (+) |
| G1475261 | LOC100194703 | non-coding | upstream | 68432 | 64442221 ~ 64442495 (+) |
| G1475223 | NA | non-coding | upstream | 131729 | 64373545 ~ 64379198 (+) |
| G1475807 | NA | non-coding | downstream | 7462 | 64518729 ~ 64519172 (+) |
| G1475832 | NA | non-coding | downstream | 81959 | 64593226 ~ 64593455 (+) |
| G1475836 | NA | non-coding | downstream | 86431 | 64597698 ~ 64597919 (+) |
| tmcc2 | LOC106565656 | other | upstream | 822837 | 63684043 ~ 63691033 (+) |
| srsf3b | LOC106565658 | other | upstream | 847673 | 63658373 ~ 63663255 (+) |
| G1474159 | NA | other | upstream | 1293333 | 63216948 ~ 63217594 (+) |
| G1473177 | NA | other | upstream | 1799791 | 62710339 ~ 62711136 (+) |
| G1473171 | LOC106581772 | other | upstream | 1812112 | 62698503 ~ 62698815 (+) |
| G1475820 | NA | other | downstream | 52107 | 64563374 ~ 64565146 (+) |
| G1476510 | NA | other | downstream | 792150 | 65303417 ~ 65304128 (+) |
| G1476520 | NA | other | downstream | 814610 | 65325877 ~ 65327163 (+) |
