G1475997


Basic Information

Item Value
gene id G1475997
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 64713430 ~ 64713631 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1688000
gtcctaaggTTAAAAAATAACCCGCCTTCACTAAAaccctaaaataaagcagcttaaaTGGATTTTAACCCCCAcatctattttgcatgaagaaagaacatgtcattcatcacaaactttgtaAATATTTGGGTTTTCCCTGTTCACcatgcagaaagactgcatttaatcagtggacaccactctTTTTATTACAAtacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1688000 True 202 lncRNA 0.35 1 64713430 64713631

Neighbor

gene id symbol gene type direction distance location
LOC110494386 LOC106565630 coding upstream 88319 64608194 ~ 64625111 (+)
si:ch211-117k10.3 LOC106565633 coding upstream 122966 64581666 ~ 64590850 (+)
LOC110494383 LOC106565632 coding upstream 132288 64572003 ~ 64581346 (+)
nucks1a LOC106565634 coding upstream 160075 64527073 ~ 64553355 (+)
cldn19 cldn19 coding upstream 432817 64256904 ~ 64280613 (+)
LOC110494389 NA coding downstream 41763 64755321 ~ 64780475 (+)
LOC110494390 klhdc8a coding downstream 89279 64802910 ~ 64823080 (+)
LOC110494391 LOC106565625 coding downstream 133337 64846968 ~ 64881151 (+)
LOC110494394 LOC106565623 coding downstream 183232 64896863 ~ 64914194 (+)
LOC110494396 LOC106565619 coding downstream 282951 64996582 ~ 65014790 (+)
G1475842 NA non-coding upstream 84037 64618731 ~ 64629393 (+)
G1475836 NA non-coding upstream 115511 64597698 ~ 64597919 (+)
G1475832 NA non-coding upstream 119975 64593226 ~ 64593455 (+)
G1476011 NA non-coding downstream 8832 64722463 ~ 64722906 (+)
G1476014 NA non-coding downstream 11136 64724767 ~ 64725095 (+)
G1476020 NA non-coding downstream 16263 64729894 ~ 64730133 (+)
G1476059 NA non-coding downstream 71781 64785412 ~ 64785613 (+)
G1475820 NA other upstream 148284 64563374 ~ 64565146 (+)
tmcc2 LOC106565656 other upstream 1025340 63684043 ~ 63691033 (+)
srsf3b LOC106565658 other upstream 1050176 63658373 ~ 63663255 (+)
G1474159 NA other upstream 1495836 63216948 ~ 63217594 (+)
G1476510 NA other downstream 589786 65303417 ~ 65304128 (+)
G1476520 NA other downstream 612246 65325877 ~ 65327163 (+)
G1476569 NA other downstream 704460 65418091 ~ 65466767 (+)
G1476898 NA other downstream 1068148 65781779 ~ 65783335 (+)

Expression


Co-expression Network