G1476334


Basic Information

Item Value
gene id G1476334
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 65043840 ~ 65044233 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1688428
agaatggtccaccacccaacagacatccagccaatttgacacaactgtgggaagcgttggagtcaacatgggccagcatccctgtggaacgctttcgacaccatgtagagtccatgcccagacgaattgaggctgttctcagGGTAAAACGgggtgcaactcagtattaggaaggtgttcctaatgttttgtacactcagtataaatatcttatgtaatcatagaaagcgTGTATGTACAACATAGTACGCAGAGGTCGTAGATcagtggagatcttcacaattgctataataatctgtgaagaatctcaaacagcattgatcacttgcactatgTACTTTTAATGTTATCTCAACTGCAATTCTGGTCATTTGGTTGAGCTATTAGATTATGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1688428 True 394 lncRNA 0.42 1 65043840 65044233

Neighbor

gene id symbol gene type direction distance location
LOC110494396 LOC106565619 coding upstream 29050 64996582 ~ 65014790 (+)
LOC110494394 LOC106565623 coding upstream 129646 64896863 ~ 64914194 (+)
LOC110494391 LOC106565625 coding upstream 162689 64846968 ~ 64881151 (+)
LOC110494390 klhdc8a coding upstream 220760 64802910 ~ 64823080 (+)
LOC110494389 NA coding upstream 269111 64755321 ~ 64780475 (+)
LOC118940493 NA coding downstream 409119 65453352 ~ 65454830 (+)
LOC118940487 oncmyk-dab coding downstream 479466 65523697 ~ 65552657 (+)
LOC110494410 LOC106565693 coding downstream 528134 65572367 ~ 65578944 (+)
LOC110516128 LOC106565694 coding downstream 536023 65580256 ~ 65649976 (+)
LOC110494417 LOC106565918 coding downstream 1347163 66391396 ~ 66401187 (+)
G1476333 NA non-coding upstream 1504 65042127 ~ 65042336 (+)
G1476330 NA non-coding upstream 2305 65041266 ~ 65041535 (+)
G1476227 NA non-coding upstream 14203 65029390 ~ 65029637 (+)
G1476220 NA non-coding upstream 33783 65009506 ~ 65010057 (+)
G1476189 NA non-coding upstream 101089 64942452 ~ 64942751 (+)
G1476337 NA non-coding downstream 4629 65048862 ~ 65049094 (+)
G1476346 NA non-coding downstream 10028 65054261 ~ 65054483 (+)
G1476393 NA non-coding downstream 63283 65107516 ~ 65110679 (+)
G1476398 NA non-coding downstream 70442 65114675 ~ 65115824 (+)
G1476427 NA non-coding downstream 103978 65148211 ~ 65149053 (+)
LOC110494386 LOC106565630 other upstream 421671 64608194 ~ 64625111 (+)
G1475820 NA other upstream 478694 64563374 ~ 64565146 (+)
tmcc2 LOC106565656 other upstream 1355750 63684043 ~ 63691033 (+)
srsf3b LOC106565658 other upstream 1380586 63658373 ~ 63663255 (+)
G1476510 NA other downstream 259184 65303417 ~ 65304128 (+)
G1476520 NA other downstream 281644 65325877 ~ 65327163 (+)
G1476569 NA other downstream 373858 65418091 ~ 65466767 (+)
G1476898 NA other downstream 737546 65781779 ~ 65783335 (+)
G1477313 NA other downstream 1244639 66288872 ~ 66290448 (+)

Expression


Co-expression Network