G1476398


Basic Information

Item Value
gene id G1476398
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 65114675 ~ 65115824 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1688506
CTGCAATTGCACCGCACTCAAAcagaaggctctccagagggtagtgcctCATCCCAAAGGCAACAATctggggggcaaactacctgccctccaggacacctccagcacccgatgtcacaggaaggacaaaaagatcatcaaggacaacaaccatccgagccactgcctgttcaccccgctatcatccaggaggcgagtgTGCCTGATCCTGATCCTGAGACCCTCACAACACACAGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1688506 True 238 lncRNA 0.55 2 65114675 65115824

Neighbor

gene id symbol gene type direction distance location
LOC110494396 LOC106565619 coding upstream 99885 64996582 ~ 65014790 (+)
LOC110494394 LOC106565623 coding upstream 200481 64896863 ~ 64914194 (+)
LOC110494391 LOC106565625 coding upstream 233524 64846968 ~ 64881151 (+)
LOC110494390 klhdc8a coding upstream 291595 64802910 ~ 64823080 (+)
LOC110494389 NA coding upstream 339946 64755321 ~ 64780475 (+)
LOC118940493 NA coding downstream 337528 65453352 ~ 65454830 (+)
LOC118940487 oncmyk-dab coding downstream 407875 65523697 ~ 65552657 (+)
LOC110494410 LOC106565693 coding downstream 456543 65572367 ~ 65578944 (+)
LOC110516128 LOC106565694 coding downstream 464432 65580256 ~ 65649976 (+)
LOC110494417 LOC106565918 coding downstream 1275572 66391396 ~ 66401187 (+)
G1476393 NA non-coding upstream 3996 65107516 ~ 65110679 (+)
G1476346 NA non-coding upstream 60192 65054261 ~ 65054483 (+)
G1476337 NA non-coding upstream 65581 65048862 ~ 65049094 (+)
G1476334 NA non-coding upstream 70442 65043840 ~ 65044233 (+)
G1476333 NA non-coding upstream 72339 65042127 ~ 65042336 (+)
G1476427 NA non-coding downstream 32387 65148211 ~ 65149053 (+)
G1476476 NA non-coding downstream 132812 65248636 ~ 65273516 (+)
G1476477 NA non-coding downstream 135510 65251334 ~ 65297660 (+)
G1476531 NA non-coding downstream 238426 65354250 ~ 65354508 (+)
G1476550 NA non-coding downstream 277440 65393264 ~ 65400606 (+)
LOC110494386 LOC106565630 other upstream 492506 64608194 ~ 64625111 (+)
G1475820 NA other upstream 549529 64563374 ~ 64565146 (+)
tmcc2 LOC106565656 other upstream 1426585 63684043 ~ 63691033 (+)
srsf3b LOC106565658 other upstream 1451421 63658373 ~ 63663255 (+)
G1476510 NA other downstream 187593 65303417 ~ 65304128 (+)
G1476520 NA other downstream 210053 65325877 ~ 65327163 (+)
G1476569 NA other downstream 302267 65418091 ~ 65466767 (+)
G1476898 NA other downstream 665955 65781779 ~ 65783335 (+)
G1477313 NA other downstream 1173048 66288872 ~ 66290448 (+)

Expression


Co-expression Network