G1476427


Basic Information

Item Value
gene id G1476427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 65148211 ~ 65149053 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1688536
ctgtctagatgtctatagggaacactactgacacctgtctagatgtctatagggaacactactgacacctgtctagacgTCTATAGGgagcactactgacacctgtctagctgtctataaggaacattactgacacctgtctatagggaacacttctgacacctgtctagctgtctatagggaacactactgacacctgtctagatgtctatagggaacactactgacacctgtctagctgtctatagggaacattactgacacctgtctagaggGAACACTACTacacctgtctagctgtctatagggaacactactgacacctgtctagatgtctatagggaacactactgacacctgtctgtagggaacactactgacaccaatctagctgtctatagggaacaatACTGACaactgtctagctgtctatagggaacactactgacacctgtctagatgtctatagggaacactactgacacctgtctagatgtctatagggaacactactgacacctgtctatagggaacactactgacacatgtctatatgtctatggggaacactactgacacctgtctagatgtctatagggagcactactgacacctgtctagctgtctatagggaacattactgacacctgtctatagggaacactactgacacctgtctagatgtctatagggaacattactgacacctgtctgtagggagcactactgacacctgtctagctgtctatagggaacaccactgacacctgtctagatgtctatagggaacactactgacacctgtctagatatctatagggaacattactgacacctgtctat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1688536 True 843 lncRNA 0.45 1 65148211 65149053

Neighbor

gene id symbol gene type direction distance location
LOC110494396 LOC106565619 coding upstream 133421 64996582 ~ 65014790 (+)
LOC110494394 LOC106565623 coding upstream 234017 64896863 ~ 64914194 (+)
LOC110494391 LOC106565625 coding upstream 267060 64846968 ~ 64881151 (+)
LOC110494390 klhdc8a coding upstream 325131 64802910 ~ 64823080 (+)
LOC110494389 NA coding upstream 373482 64755321 ~ 64780475 (+)
LOC118940493 NA coding downstream 304299 65453352 ~ 65454830 (+)
LOC118940487 oncmyk-dab coding downstream 374646 65523697 ~ 65552657 (+)
LOC110494410 LOC106565693 coding downstream 423314 65572367 ~ 65578944 (+)
LOC110516128 LOC106565694 coding downstream 431203 65580256 ~ 65649976 (+)
LOC110494417 LOC106565918 coding downstream 1242343 66391396 ~ 66401187 (+)
G1476398 NA non-coding upstream 32387 65114675 ~ 65115824 (+)
G1476393 NA non-coding upstream 37532 65107516 ~ 65110679 (+)
G1476346 NA non-coding upstream 93728 65054261 ~ 65054483 (+)
G1476337 NA non-coding upstream 99117 65048862 ~ 65049094 (+)
G1476334 NA non-coding upstream 103978 65043840 ~ 65044233 (+)
G1476476 NA non-coding downstream 99583 65248636 ~ 65273516 (+)
G1476477 NA non-coding downstream 102281 65251334 ~ 65297660 (+)
G1476531 NA non-coding downstream 205197 65354250 ~ 65354508 (+)
G1476550 NA non-coding downstream 244211 65393264 ~ 65400606 (+)
G1476551 NA non-coding downstream 246658 65395711 ~ 65402635 (+)
LOC110494386 LOC106565630 other upstream 526042 64608194 ~ 64625111 (+)
G1475820 NA other upstream 583065 64563374 ~ 64565146 (+)
tmcc2 LOC106565656 other upstream 1460121 63684043 ~ 63691033 (+)
srsf3b LOC106565658 other upstream 1484957 63658373 ~ 63663255 (+)
G1476510 NA other downstream 154364 65303417 ~ 65304128 (+)
G1476520 NA other downstream 176824 65325877 ~ 65327163 (+)
G1476569 NA other downstream 269038 65418091 ~ 65466767 (+)
G1476898 NA other downstream 632726 65781779 ~ 65783335 (+)
G1477313 NA other downstream 1139819 66288872 ~ 66290448 (+)

Expression

G1476427 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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G1476427 Expression in each Bioproject

Bar chart with 2 bars.
G1476427 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network