G1476520


Basic Information

Item Value
gene id G1476520
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 65325877 ~ 65327163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1688655
aaacatgactgttttgatagtaaacatgactgttttgatagtgaacatgactattttgatagtaaacatgacagttttgtacctagtaaacatgactgttttgatagtaaACTTGTCAGTTTTGATAGTAAACGTGACTGTTTTGACAGTAAACGTGACCGTTTTGATAGTAAAGATGACTGTTTTGTACCTAGTAAACTTGCCTGTTTGATAGTGAACATTACtattttgatagtaaacatgactgttttgatagtgaacatgactgTTTTGACAGTAAACGTGACCGTTTTGATAGTAAACCTGACTGGTTTGTAcctagtaaacatgactgttttgatagtgaacatgactattttgatagtaaacatgactgttttgatagtaaACTTGCCTGTTTTGATTGTGAACATGACcgttttgatagtaaacatgactattttgatagtaaacatgacagttttgtacctagtaaacaggactgttttgatagtgaacatgactattTTGATAGTAAATATGACCGTTTTGTAcctagtaaacatgactgttttgatagtgaacatgactattttgatagaaaacatgacagttttgtacctagtaaacatgactgttttgatagtgaacataactattttgatagaaaacatgacagttttgtacctagtaaacatgactgttttgatagtaaac

Function

NR:

description
Ligand-dependent nuclear receptor corepressor-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1688655 True 696 TUCP 0.31 2 65325877 65327163
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110494396 LOC106565619 coding upstream 311087 64996582 ~ 65014790 (+)
LOC110494394 LOC106565623 coding upstream 411683 64896863 ~ 64914194 (+)
LOC110494391 LOC106565625 coding upstream 444726 64846968 ~ 64881151 (+)
LOC110494390 klhdc8a coding upstream 502797 64802910 ~ 64823080 (+)
LOC110494389 NA coding upstream 551148 64755321 ~ 64780475 (+)
LOC118940493 NA coding downstream 126189 65453352 ~ 65454830 (+)
LOC118940487 oncmyk-dab coding downstream 196536 65523697 ~ 65552657 (+)
LOC110494410 LOC106565693 coding downstream 245204 65572367 ~ 65578944 (+)
LOC110516128 LOC106565694 coding downstream 253093 65580256 ~ 65649976 (+)
LOC110494417 LOC106565918 coding downstream 1064233 66391396 ~ 66401187 (+)
G1476477 NA non-coding upstream 28217 65251334 ~ 65297660 (+)
G1476476 NA non-coding upstream 52361 65248636 ~ 65273516 (+)
G1476427 NA non-coding upstream 176824 65148211 ~ 65149053 (+)
G1476398 NA non-coding upstream 210053 65114675 ~ 65115824 (+)
G1476393 NA non-coding upstream 215198 65107516 ~ 65110679 (+)
G1476531 NA non-coding downstream 27087 65354250 ~ 65354508 (+)
G1476550 NA non-coding downstream 66101 65393264 ~ 65400606 (+)
G1476551 NA non-coding downstream 68548 65395711 ~ 65402635 (+)
G1476568 NA non-coding downstream 113852 65441015 ~ 65500519 (+)
G1476510 NA other upstream 21749 65303417 ~ 65304128 (+)
LOC110494386 LOC106565630 other upstream 703708 64608194 ~ 64625111 (+)
G1475820 NA other upstream 760731 64563374 ~ 64565146 (+)
tmcc2 LOC106565656 other upstream 1637787 63684043 ~ 63691033 (+)
G1476569 NA other downstream 90928 65418091 ~ 65466767 (+)
G1476898 NA other downstream 454616 65781779 ~ 65783335 (+)
G1477313 NA other downstream 961709 66288872 ~ 66290448 (+)
G1477578 LOC100194703 other downstream 1229874 66557037 ~ 66557512 (+)
kcnab2a kcnab2 other downstream 1352097 66566779 ~ 66780792 (+)

Expression

G1476520 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G1476520 Expression in each Bioproject

Bar chart with 3 bars.
G1476520 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
End of interactive chart.

Co-expression Network