G1476642


Basic Information

Item Value
gene id G1476642
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 65654338 ~ 65654572 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1688799
ACCCTCCACTAATAGACAGACATCAAAatggagatgagggaggagaaaagGAAGGATGACTATAAaaaacagacagatttttttaatggatttATCCTTTTTTGTCCAAAGGGAGGAGAAACTTTTATGAACAGTTACGGAATGACATTGTGAAGTTGGTAAAGGTTTATGTGTATTGCCGTGTGTTAAAAATTCTGATATTGCTTATTGATCTTTCCCCCTCCATTATGTCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1688799 True 235 lncRNA 0.36 1 65654338 65654572

Neighbor

gene id symbol gene type direction distance location
LOC110516128 LOC106565694 coding upstream 4362 65580256 ~ 65649976 (+)
LOC110494410 LOC106565693 coding upstream 75394 65572367 ~ 65578944 (+)
LOC118940487 oncmyk-dab coding upstream 101681 65523697 ~ 65552657 (+)
LOC118940493 NA coding upstream 199508 65453352 ~ 65454830 (+)
LOC110494396 LOC106565619 coding upstream 639548 64996582 ~ 65014790 (+)
LOC110494417 LOC106565918 coding downstream 736824 66391396 ~ 66401187 (+)
pax7a pax7a coding downstream 810883 66465455 ~ 66527607 (+)
park7 park7 coding downstream 904905 66559477 ~ 66566440 (+)
kcnab2a kcnab2 coding downstream 912207 66566779 ~ 66780792 (+)
akr7a3 LOC100194670 coding downstream 1130944 66785516 ~ 66790374 (+)
G1476471 NA non-coding upstream 34336 65617667 ~ 65620002 (+)
G1476599 NA non-coding upstream 112926 65540441 ~ 65541412 (+)
G1476460 NA non-coding upstream 116387 65534720 ~ 65537951 (+)
G1476568 NA non-coding upstream 153819 65441015 ~ 65500519 (+)
G1476858 NA non-coding downstream 28645 65683217 ~ 65683552 (+)
G1476861 NA non-coding downstream 33266 65687838 ~ 65688040 (+)
G1476870 NA non-coding downstream 48877 65703449 ~ 65703883 (+)
G1476872 NA non-coding downstream 51852 65706424 ~ 65706684 (+)
G1476914 NA non-coding downstream 170971 65825543 ~ 65832088 (+)
G1476569 NA other upstream 187571 65418091 ~ 65466767 (+)
G1476520 NA other upstream 327175 65325877 ~ 65327163 (+)
G1476510 NA other upstream 350210 65303417 ~ 65304128 (+)
LOC110494389 NA other upstream 873863 64755321 ~ 64780475 (+)
LOC110494386 LOC106565630 other upstream 1032169 64608194 ~ 64625111 (+)
G1476898 NA other downstream 127207 65781779 ~ 65783335 (+)
G1477313 NA other downstream 634300 66288872 ~ 66290448 (+)
G1477578 LOC100194703 other downstream 902465 66557037 ~ 66557512 (+)
G1477697 NA other downstream 1062801 66717373 ~ 66718688 (+)

Expression


Co-expression Network