G1476898


Basic Information

Item Value
gene id G1476898
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 65781779 ~ 65783335 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1689118
TTGCTAGGTGTCGTCAGGTCCGGCTGTGAgagactgttgttgttgttgccgtTCTCCGCGTCTCCTAGCAACCCCTCTGGTTTAACCTTTGGCCTCTCGATGAGGGGCTCCATGCTCCTGTCCAAATctggaggtaacagagagagaggagagacagacagagggacaggaccaatgttccctctaagctgcgtgGGCGCACAGCTCCCCTCAGACTgccacactgaagaaatgacgcgcagagaagcacaagattgaacttcactcaactttctagagttttccccatTAGTTAACACTATCACCGTTTCCccgttagttaacactatcaccGTTTCCccgttagttaacactatcaccGTTTCCccgttagttaacactatcaccGTTTCCCTGTAACACTATCACCGTTTCCccgttagttaacactatcaccgtttccctgttagttaacactatcaccGCTTCCccgttagttaacactatcaccGTTTCCcagctagttaacactatcacCGTTTCCCCGCTAGTTAACACTATCACCGtttccctgttagttaacactatcaccgtttccctgttagttaacactatcaccGTTTCCCCGCTAGTTAACACTATCACCGTTTCCccgttagttaacactatcaccgtttccctgttagttaacactatcaccgtttccctgttagttaacactatcacaGTTTCCctgctagttaacactatcacCGTTTCCctgctagttaacactatcaccgtttccctgttagttaacactatcaccgtttccctgttagttaacactatcaccGTTTCTctgctagttaacactatcacCGTTTCCCTGCTAGTTAAAactatcaccgtttccctgttagttaacactatcatacgtaatttccggtcacaacttgcagacttgtttacgtgttgctgtgcgcttgtgcgttttgttgccaaccttactttgctacctgacaactttacggtttttattttttaattatcgtttacattttagatttttccctcaacttttttactccggacgctttatctggacgtgattcgtcaggacctccaccagccgaagctaagtagtaacattaacatgatgctttatctggacgtggttcgtcaggacctccaccagccgaagctaagtagtaacattaacatgatgctttatctggacgtggttcgtcaggacctccaccagccgaagctaagtagtaacattaacatgatgctttatctggacgtggttcgtcaggacctccaccagccgaagctaagtagtaacattaacatgatgctttatctggacgtgattcgtcaggacctccaccagccgaagctaagtagtaacattaacatgatgctttatctggacgtggttcgtcaggacctccaccagccgaagctaagtagtaacattaacatgatgctttatctggacgtgattcgtcaggacctccaccagccgaagctaagtagtaacattaacatgatgctttatctggacgt

Function

NR:

description
PREDICTED: collagen alpha-1(IV) chain-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1689118 True 1530 TUCP 0.45 2 65781779 65783335

Neighbor

gene id symbol gene type direction distance location
LOC110516128 LOC106565694 coding upstream 131803 65580256 ~ 65649976 (+)
LOC110494410 LOC106565693 coding upstream 202835 65572367 ~ 65578944 (+)
LOC118940487 oncmyk-dab coding upstream 229122 65523697 ~ 65552657 (+)
LOC118940493 NA coding upstream 326949 65453352 ~ 65454830 (+)
LOC110494396 LOC106565619 coding upstream 766989 64996582 ~ 65014790 (+)
LOC110494417 LOC106565918 coding downstream 608061 66391396 ~ 66401187 (+)
pax7a pax7a coding downstream 682120 66465455 ~ 66527607 (+)
park7 park7 coding downstream 776142 66559477 ~ 66566440 (+)
kcnab2a kcnab2 coding downstream 783444 66566779 ~ 66780792 (+)
akr7a3 LOC100194670 coding downstream 1002181 66785516 ~ 66790374 (+)
G1476872 NA non-coding upstream 75095 65706424 ~ 65706684 (+)
G1476870 NA non-coding upstream 77896 65703449 ~ 65703883 (+)
G1476861 NA non-coding upstream 93739 65687838 ~ 65688040 (+)
G1476858 NA non-coding upstream 98227 65683217 ~ 65683552 (+)
G1476642 NA non-coding upstream 127207 65654338 ~ 65654572 (+)
G1476914 NA non-coding downstream 42208 65825543 ~ 65832088 (+)
G1476926 NA non-coding downstream 67951 65851286 ~ 65851962 (+)
G1477192 NA non-coding downstream 321429 66104764 ~ 66105102 (+)
G1477221 NA non-coding downstream 354213 66137548 ~ 66137757 (+)
G1477222 NA non-coding downstream 354531 66137866 ~ 66138107 (+)
G1476569 NA other upstream 315012 65418091 ~ 65466767 (+)
G1476520 NA other upstream 454616 65325877 ~ 65327163 (+)
G1476510 NA other upstream 477651 65303417 ~ 65304128 (+)
LOC110494389 NA other upstream 1001304 64755321 ~ 64780475 (+)
LOC110494386 LOC106565630 other upstream 1159610 64608194 ~ 64625111 (+)
G1477313 NA other downstream 505537 66288872 ~ 66290448 (+)
G1477578 LOC100194703 other downstream 773702 66557037 ~ 66557512 (+)
G1477697 NA other downstream 934038 66717373 ~ 66718688 (+)
iffo2b LOC106565910 other downstream 1050237 66798767 ~ 66840370 (+)

Expression


Co-expression Network