G1477313



Basic Information


Item Value
gene id G1477313
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 66288872 ~ 66290448 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1689604
tctccttctgtctttctctctgccccgtccttgtctccttctgtctttctctctgccccgtccagctccccttctgtatttctctcttccccgtccagctctccttctgtctttctctctgccccgtccagctccccttccgtccttctctctgcccaatccagctctccttctgtctttctctctgccccatccacctccctttctgtctctctctctgcctcgtccagctctccttctgtatttctctctgccccgtccagctctccttctgtctttctctctgccccgtccagctctctttctgtccttctctctgccccgcccagctttctttctgtctttctctctctgccccatatagctctctctatttctttctctctgccccgtccagctctccttctgtctttctctctgccccgtccagctctccttctgcctttctctctgccccgtccagctccccttccgtatttctctctgcctcttccagctctccttctgtctttctctctgccccgtccagctctccttctgtcttcctctctgcccaatccagctctccttctgtctttttctctgccccatccagctcttcttctgtctttctcactgccccgtccagctccccttctgtctttctctctgccccgtccagctctcattctctctttctctctccccctttcagctctccttctgtctttctctctgcctcgtccagctctccttctgtcattctctctgccccatccagctccccttctgtctttctctctgccccgtccagctctcattctctctttctctctccccctttcagctctccttttgtctttctctctgcctcgtcCAGCTCCCCTTccgtccttctctctgccccatccagctctccttctgtctttctctctgccccatccacctccccttctgtctctctctctgcctcgtccagctctccttctgtatttctctctgccccgtccagctctctttctgtccttctctctgccccgcccagctttctttctgtctttctctctctgtcccgtccAGCTCTCtttatgtctttctctctgccccgtccagttctttttatctttctctctgccccgtccagctctccttctgtccttctctctgccccgtccaggtctccttctgtctttctctctgccccatccagctctccttccttctttctttctgccCCGTgtatctctccttctgtctttctctctgccccgcccagctccccttctgtctttctctctgccccgtccatctctccttctgtctttctctctgccccgtccagctctccttctgtctttctctctggcccatccagctctccttctgtctttctctctgccccgtccttgtctccttctgtctttctctctgccccgtccagctccccttctgtatttctctctgccccgtccagctctccttctgtctttctctctgccccgtccagctctctttctgtccttctctctgccccgcccagctttctttctgtctttctctctctgccccatatagctctctctatgtctttctctctg

Function


NR:

description
PREDICTED: uncharacterized protein LOC106594931 isoform X3

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1689604 True 1577 TUCP 0.55 1 66288872 66290448
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110516128 LOC106565694 coding upstream 638896 65580256 ~ 65649976 (+)
LOC110494410 LOC106565693 coding upstream 709928 65572367 ~ 65578944 (+)
LOC118940487 oncmyk-dab coding upstream 736215 65523697 ~ 65552657 (+)
LOC118940493 NA coding upstream 834042 65453352 ~ 65454830 (+)
LOC110494396 LOC106565619 coding upstream 1274082 64996582 ~ 65014790 (+)
LOC110494417 LOC106565918 coding downstream 100948 66391396 ~ 66401187 (+)
pax7a pax7a coding downstream 175007 66465455 ~ 66527607 (+)
park7 park7 coding downstream 269029 66559477 ~ 66566440 (+)
kcnab2a kcnab2 coding downstream 276331 66566779 ~ 66780792 (+)
akr7a3 LOC100194670 coding downstream 495068 66785516 ~ 66790374 (+)
G1477309 NA non-coding upstream 22612 66246455 ~ 66266260 (+)
G1477303 NA non-coding upstream 59099 66228763 ~ 66229773 (+)
G1477293 NA non-coding upstream 76973 66211593 ~ 66211899 (+)
G1477284 NA non-coding upstream 84227 66204372 ~ 66204645 (+)
G1477231 NA non-coding upstream 142298 66146373 ~ 66146574 (+)
G1477326 NA non-coding downstream 35841 66326289 ~ 66326506 (+)
G1477328 NA non-coding downstream 43509 66333957 ~ 66334181 (+)
G1477331 LOC106565959 non-coding downstream 47822 66338270 ~ 66338626 (+)
G1477332 NA non-coding downstream 48755 66339203 ~ 66339468 (+)
G1477333 LOC106565959 non-coding downstream 49069 66339517 ~ 66339919 (+)
G1476898 NA other upstream 505537 65781779 ~ 65783335 (+)
G1476569 NA other upstream 822105 65418091 ~ 65466767 (+)
G1476520 NA other upstream 961709 65325877 ~ 65327163 (+)
G1476510 NA other upstream 984744 65303417 ~ 65304128 (+)
LOC110494389 NA other upstream 1508397 64755321 ~ 64780475 (+)
G1477578 LOC100194703 other downstream 266589 66557037 ~ 66557512 (+)
G1477697 NA other downstream 426925 66717373 ~ 66718688 (+)
iffo2b LOC106565910 other downstream 543124 66798767 ~ 66840370 (+)
LOC110494429 LOC106565956 other downstream 577077 66867211 ~ 66867881 (+)

Expression


G1477313 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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G1477313 Expression in each Bioproject

Bar chart with 14 bars.
G1477313 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 40.
End of interactive chart.

Co-expression Network