G1477369


Basic Information

Item Value
gene id G1477369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 66407283 ~ 66407572 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1689663
CTGATACATGTTTTTAATTGCCACACATTACTTACTCCTTATTTCCATTGGTTGGAAGGTAATGTTGGTAACCTGGATTCGCACATTTTCAAATGCTTGACTGATGATCATCAGGTTATCTGTGTTGTTCAAGATATTCCTAAGTATGGGTTCCAGTTCATTGTTGAGGAAATCAATTTGGGATGCATTGTTGGGATAGGAGTATTCCGCTATGCTCTCTGCAACTATACTTCCAGGTCTAGAAGAATAGACATAAATCACATTTCAAGAGTTCAACAGTTGATTAATAT

Function

NR:

description
mucin-3A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1689663 True 290 lncRNA 0.37 1 66407283 66407572

Neighbor

gene id symbol gene type direction distance location
LOC110494417 LOC106565918 coding upstream 6096 66391396 ~ 66401187 (+)
LOC110516128 LOC106565694 coding upstream 757307 65580256 ~ 65649976 (+)
LOC110494410 LOC106565693 coding upstream 828339 65572367 ~ 65578944 (+)
LOC118940487 oncmyk-dab coding upstream 854626 65523697 ~ 65552657 (+)
LOC118940493 NA coding upstream 952453 65453352 ~ 65454830 (+)
pax7a pax7a coding downstream 57883 66465455 ~ 66527607 (+)
park7 park7 coding downstream 151905 66559477 ~ 66566440 (+)
kcnab2a kcnab2 coding downstream 159207 66566779 ~ 66780792 (+)
akr7a3 LOC100194670 coding downstream 377944 66785516 ~ 66790374 (+)
iffo2b LOC106565910 coding downstream 391195 66798767 ~ 66840370 (+)
G1477361 NA non-coding upstream 24698 66382357 ~ 66382585 (+)
G1477359 NA non-coding upstream 26352 66380653 ~ 66380931 (+)
G1477333 LOC106565959 non-coding upstream 67364 66339517 ~ 66339919 (+)
G1477332 NA non-coding upstream 67815 66339203 ~ 66339468 (+)
G1477331 LOC106565959 non-coding upstream 68657 66338270 ~ 66338626 (+)
G1477370 LOC106565917 non-coding downstream 1636 66409208 ~ 66410103 (+)
G1477371 LOC106565917 non-coding downstream 4220 66411792 ~ 66418996 (+)
G1477379 LOC106565917 non-coding downstream 16713 66424285 ~ 66424652 (+)
G1477378 LOC106565917 non-coding downstream 19088 66426660 ~ 66427037 (+)
G1477381 NA non-coding downstream 19648 66427220 ~ 66427556 (+)
G1477313 NA other upstream 116835 66288872 ~ 66290448 (+)
G1476898 NA other upstream 623948 65781779 ~ 65783335 (+)
G1476569 NA other upstream 940516 65418091 ~ 65466767 (+)
G1476520 NA other upstream 1080120 65325877 ~ 65327163 (+)
G1476510 NA other upstream 1103155 65303417 ~ 65304128 (+)
G1477578 LOC100194703 other downstream 149465 66557037 ~ 66557512 (+)
G1477697 NA other downstream 309801 66717373 ~ 66718688 (+)
LOC110494429 LOC106565956 other downstream 459953 66867211 ~ 66867881 (+)

Expression


Co-expression Network